DN617516

Overview
NameDN617516
Unique NameDN617516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_MOUSE (Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C T L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_HUMAN (Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C T L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_CERAE (Protein yippee-like 5 OS=Cercopithecus aethiops GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C T L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_BOVIN (Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C T L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_MACFA (Protein yippee-like 5 OS=Macaca fascicularis GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.832e-16
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C   L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDAILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPL2_CAEEL (Protein yippee-like B0546.4 OS=Caenorhabditis elegans GN=B0546.4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.596e-15
Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 2
Query:  164 MGRLF--VVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR F  +    G +Y C  C T+L   +++ SK+F    G A LF +  NV  G  E R M TG HTV D+FCV C   +GW YE A  +SQ Y
Sbjct:    1 MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTY 95          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: MOH1_YEAST (Protein yippee-like MOH1 OS=Saccharomyces cerevisiae GN=MOH1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.391e-15
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  203 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            Y C+HC+THL+    ++S+ +  R G AYL +KVVNV  G+ E+R M+TG + V DI C  C   VGWKY  +    Q+Y
Sbjct:   43 YGCRHCKTHLSSSFQIISRDYRGRTGTAYLMNKVVNVVEGKVEQRRMLTGDYLVCDILCHWCKRNVGWKYLQSSNDDQQY 122          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL5_ARATH (Protein yippee-like At4g27740 OS=Arabidopsis thaliana GN=At4g27740 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.198e-14
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  203 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            Y C++C   LAL ED++SK F    G A++FS  +NV VG K  R ++TG + VAD+ C  CG  +GWKY    +  Q+Y
Sbjct:   10 YFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVVVGPKIGRKLITGSYVVADVMCSKCGETLGWKYVETFDLKQRY 89          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL_SCHPO (Protein yippee-like PJ691.02 OS=Schizosaccharomyces pombe GN=SPAPJ691.02 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.091e-13
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR + V+L+ + Y C  C+THLA    ++S  +  ++G A LF +V NV   E +   M TG   V  I C  C + +GWKY +++E SQK+
Sbjct:    1 MGRYYPVHLKSRCYVCAKCKTHLAFKGHLLSHDYRGKNGPACLFKRVENVIEMEPKTEQMSTGRFIVRHIHCCRCHTYIGWKYVSSYEPSQKF 93          
The following BLAST results are available for this feature:
BLAST of DN617516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YPEL5_MOUSE1.798e-1642.55Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=... [more]
YPEL5_HUMAN1.798e-1642.55Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=... [more]
YPEL5_CERAE1.798e-1642.55Protein yippee-like 5 OS=Cercopithecus aethiops GN... [more]
YPEL5_BOVIN1.798e-1642.55Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 ... [more]
YPEL5_MACFA6.832e-1641.49Protein yippee-like 5 OS=Macaca fascicularis GN=YP... [more]
YPL2_CAEEL2.596e-1543.16Protein yippee-like B0546.4 OS=Caenorhabditis eleg... [more]
MOH1_YEAST3.391e-1545.00Protein yippee-like MOH1 OS=Saccharomyces cerevisi... [more]
YIPL5_ARATH2.198e-1443.75Protein yippee-like At4g27740 OS=Arabidopsis thali... [more]
YIPL_SCHPO1.091e-1338.71Protein yippee-like PJ691.02 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617516 ID=DN617516; Name=DN617516; organism=Citrus sinensis; type=EST; length=444bp
CTTTCTCAAGCATCTCCCTTTTATTAAATTTTCTTTATTTTCAAGTAATT
TTCTTTTTGTTTGTTTTCAATGATTCATTCAACCACCACCGTCTTGTTTG
ATTTTTGATTTTGTGTGTATTTTTTTCCTGCAAAGATCTGTTGGTAGAGT
AGTGTGAAGAATTATGGGGAGGCTATTTGTGGTGAATCTTGAAGGGAAGA
TCTATAGCTGCAAGCACTGCAGGACCCATCTTGCTTTATGTGAAGACGTC
GTCTCTAAGTCTTTCCATTGCAGGCATGGGAAAGCTTATCTCTTCAGTAA
GGTTGTGAATGTTTCTGTTGGAGAGAAAGAGGAGAGATTGATGATGACTG
GGATGCATACAGTGGCTGACATTTTCTGTGTTGGGTGTGGATCAATTGTC
GGTTGGAAATACGAGACTGCCCATGAAAAGAGCCAAAAGTACAA
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