DN617515

Overview
NameDN617515
Unique NameDN617515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_ORYLA (Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EERL++TG+H VADI+C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIYCENCHTTLGWKYEQAFELSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_DANRE (Proteim yippee-like 3 OS=Danio rerio GN=ypel3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EERL++TG+H VADI+C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIYCENCHTTLGWKYEQAFELSQKYKEGKFIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_MOUSE (Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_HUMAN (Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_CERAE (Protein yippee-like 3 OS=Cercopithecus aethiops GN=YPEL3 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL3_BOVIN (Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = -2
Query:  225 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 488
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   21 YSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPL1_DROME (Protein yippee-like CG15309 OS=Drosophila melanogaster GN=CG15309 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.796e-26
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF    G AYLF+ VVNV+ G+ EER+++TG+H VADI+C  C + +GWKYE A+E SQKYKEGK ++E
Sbjct:   14 RTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVVNVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKFIIE 103          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL2_PONAB (Protein yippee-like 2 OS=Pongo abelii GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26
Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL2_MOUSE (Protein yippee-like 2 OS=Mus musculus GN=Ypel2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26
Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL2_HUMAN (Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26
Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108          
The following BLAST results are available for this feature:
BLAST of DN617515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YPEL3_ORYLA1.788e-2660.23Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 ... [more]
YPEL3_DANRE1.788e-2660.23Proteim yippee-like 3 OS=Danio rerio GN=ypel3 PE=2... [more]
YPEL3_MOUSE5.203e-2659.09Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=... [more]
YPEL3_HUMAN5.203e-2659.09Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=... [more]
YPEL3_CERAE5.203e-2659.09Protein yippee-like 3 OS=Cercopithecus aethiops GN... [more]
YPEL3_BOVIN5.203e-2659.09Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 ... [more]
YPL1_DROME6.796e-2656.67Protein yippee-like CG15309 OS=Drosophila melanoga... [more]
YPEL2_PONAB8.875e-2656.67Protein yippee-like 2 OS=Pongo abelii GN=YPEL2 PE=... [more]
YPEL2_MOUSE8.875e-2656.67Protein yippee-like 2 OS=Mus musculus GN=Ypel2 PE=... [more]
YPEL2_HUMAN8.875e-2656.67Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617515 ID=DN617515; Name=DN617515; organism=Citrus sinensis; type=EST; length=597bp
TTTCAATTAGGTTATTGACAGTGCATTGCATTTGCCGAGCTGCAGCTGAA
TTGAAGAATAACCGAGTTTGAGCATTCACAAGTTGAATGGGAAATTTGAT
GGTTAAAGAATATACAGGTGGAATTGATGGGTAGTAGTCAAGCATCATCT
GCGTCACTTCCGCCAACATGAGCTTCGTGACTTACCCAATAATTGCTTCC
GTCAGGGCCGGAAACCTTAAACCGTTCAAGGACGGATTTCCCTTCCTTGT
ACTTTTGGCTCTTTTCATGGGCAGTCTCGTATTTCCAACCGACAATTGAT
CCACACCCAACACAGAAAATGTCAGCCACTGTATGCATCCCAGTCATCAT
CAATCTCTCCTCTTTCTCTCCAACAGAAACATTCACAACCTTACTGAAGA
GATAAGCTTTCCCATGCCTGCAATGGAAAGACTTAGAGACGACGTCTTCA
CATAAAGCAAGATGGGTCCTGCAGTGCTTGCAGCTATAGATCTTCCCTTC
AAGATTCACCACAAATAGCCTCCCCATAATTCTTCACACTACTCTACCAA
CAGATCTTTGCAGGAAAAAAATACACACAAAATCAAAAATCAAACAA
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