DN617514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.044e-22 Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 526 R+PC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW Sbjct: 159 RVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 4.554e-22 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 526 R+ C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF +T + G+ + +V P W Sbjct: 153 RVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 5.947e-22 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 526 R+ C ++GG+RFTV G +F LVL+ NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF +T + G+ + +V P W Sbjct: 152 RVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.035e-21 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 526 R+ C ++GG+RF+++G S+F VLI+NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF++T G+T+ S +V P W Sbjct: 154 RVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20 Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 526 R+PCAK GG++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF+LT SDG +V P +W Sbjct: 210 RVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGR-TVTSNNVVPGNW 526 R+ C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF+LT+ R T+ + N P +W Sbjct: 154 RVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.054e-18 Identity = 37/91 (40.66%), Postives = 63/91 (69.23%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 526 ++ C ++GGI++T+ G+ +N+V++ NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F++ D R TS V P +W Sbjct: 188 KVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of DN617514 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17 Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = -3 Query: 257 RIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 526 R+PCA+ GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF++T+ + G+T+ + V P +W Sbjct: 162 RVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253 The following BLAST results are available for this feature:
BLAST of DN617514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617514 ID=DN617514; Name=DN617514; organism=Citrus sinensis; type=EST; length=528bpback to top |