DN617513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.737e-36 Identity = 73/145 (50.34%), Postives = 90/145 (62.07%), Query Frame = 2 Query: 125 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 W G ATFY YGNLY QGYG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+CPPN L GGWCN HFDM++PA+ I Y AGI+PI ++++ C + GG+RFT+NG +YF Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYF 165
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.800e-35 Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 107 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFN 553 G GW HAT+Y Y N Y G+G +TAALS LF +G SCG CY+++C+ DPKWCL G ++ VTATNFCP +N+N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN Sbjct: 21 GMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFN 168
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34 Identity = 74/161 (45.96%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 80 LNFCFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 L+ C R G Y W+ G AT+ YG+L YG TA +S ALF G +CG CYE++C N WCL GS ++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F Sbjct: 18 LSGCIRLGNGGYEE-WRMGSATYIKESLGHPLNDGGGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASF 177
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.395e-34 Identity = 69/143 (48.25%), Postives = 91/143 (63.64%), Query Frame = 2 Query: 125 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 W+S A++Y +G+L GYG T LSTALF G +CG CYE+KC +D K+CLPG SI+VTATNFC PN L D GG CNPP HF + +F +IA ++AG++PI +RR+ C + GG+RF V G S+F Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFF 174
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33 Identity = 65/143 (45.45%), Postives = 87/143 (60.84%), Query Frame = 2 Query: 125 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 W+ AT+Y YG+L GYG T LS LF G CG+C+E++C +D +WC+PG SII+TATNFC PN D GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G F Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIF 182
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.177e-32 Identity = 59/121 (48.76%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 194 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 YG+L + +A LS LFN G SCG+C E++C N +WCL GS ++VTAT+FCPPN LS+D GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G S+F Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHF 173
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.150e-32 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 194 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGH 541 YG+L GYG TAALSTALFN+G SCG+CYE+ C +P+ CL GSI +TAT+ CPP A WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+ Sbjct: 69 YGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGN 177
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.476e-29 Identity = 66/145 (45.52%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 125 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYF 550 W G ATFY YGNLY Q YG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+ GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG +YF Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYF 156
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.064e-23 Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 119 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFN 553 G W GHATFY G + GYG TAA+S ALF+NG CG+CYE+K ++ +++VTATN PP + N G +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+ +N Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPV---NGMKG------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYN 208
BLAST of DN617513 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 47/151 (31.13%), Postives = 67/151 (44.37%), Query Frame = 2 Query: 116 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKGGIRFTVNGHS 544 G GW SG AT+Y Y + Q + + AA +LF NG CGSCY++KC + + C + V T+ CP GG C HFDM+ AF +A AG++ I ++R+PC + F V+ S Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGS 182 The following BLAST results are available for this feature:
BLAST of DN617513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617513 ID=DN617513; Name=DN617513; organism=Citrus sinensis; type=EST; length=553bpback to top |