DN617500

Overview
NameDN617500
Unique NameDN617500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPT--YLRKPHLFPKLPVHFR---DTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK++  ++PG+  G+  +F      KL W +  +  + P+   L   ++   L    R   +    Y +E+  L+L+I+  + ++L +     +  FE    IMR+NYYPPC +P   +G  PH D   LTIL Q N + GLQ+  +G W  I+   DAF++NIGD    +  G
Sbjct:  101 EKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNG 273          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 52/163 (31.90%), Postives = 89/163 (54.60%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            EK ++    G   GF  +  +  E   DW ++   ++ PT  R    +P  P  +    E YS +L  LA  +L  +++A+ ++   +     +  Q + +NYYP CPQP L +GL  H+D G +T+LLQ +++ GLQ  +DG   W+ ++ +P AF++N+GD
Sbjct:  100 EKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVPGAFVVNLGD 261          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPT--YLRKPHLFPKLPVHFR---DTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK++  ++PG+  G+  +F      KL W +  +  + P+   L   ++   L    R   +    Y +E+  L+L+I+  + ++L +     +  FE    IMR+NYYPPC +P   +G  PH D   LTIL Q N + GLQ+  +G W  I+   DAF++NIGD    +  G
Sbjct:  101 EKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNG 273          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 51/163 (31.29%), Postives = 89/163 (54.60%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            EK ++    G   GF  +  +  E   DW ++   ++ P   R    +P  P  +R+  + YS EL  LA K+L  +++A+ +D   +     +  Q + +N+YP CPQP L +GL  H+D G +T+LLQ +++ GLQ  +D    W+ ++ +  AF++N+GD
Sbjct:  100 EKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGKTWITVQPVEGAFVVNLGD 261          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = -1
Query:  156 IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 629
            +Q  G     S+   +DW   F +   PT        P L   +R  ++ ++A++  L+ ++L  + + L ++   +K+ F    G     +++ YPPCP+P L+ GL  H+DAGG+ +L Q +++ GLQ+ KDG WV +  +  + ++N+GD LEVI  G
Sbjct:   75 VQTKGLVSAESQVNDIDWESTFYLRHRPT--SNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNG 233          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -1
Query:  156 GQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 617
            G   V +E   LDW   F +  LP  +      P L   +R+ +  ++  L  LA ++L  + + L ++   +K  F   +G     +++ YPPCP+P L+ GL  H+DAGG+ +L Q +++ GLQ+ KD  W+ +  +  + +IN+GD LEVI  G
Sbjct:   73 GLEAVQAEVTDLDWESTFFLRHLP--VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNG 227          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 48/150 (32.00%), Postives = 84/150 (56.00%), Query Frame = -1
Query:  156 EEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 596
            E   +DW   F +  LP+        P L   +R+ +  +   L  LA ++L  + + L ++ + +K+ F   +G     +++ YPPCP+P L+ GL  H+DAGG+ +L Q +++ GLQ+ KDG W+ +  +  + ++N+GD LEVI  G
Sbjct:   80 EVTDMDWESTFFLRHLPS--SNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.855e-18
Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPT--YLRKPHLFPKLPVHFR---DTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK++  + PG+  G+  +F      KL W +  +  + P+   L   ++   L    R   +    Y +E+  L+L+I+  + ++L +     +  FE    IMR+NYYPPC +P   +G  PH D   LTIL Q N + GLQ+  +G W  I+   DAF++NIGD    +  G
Sbjct:  101 EKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNG 273          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.855e-18
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKD--GLWVPIKALPDAFIINIGD 662
            EK ++    G   GF  +  +  E   DW ++   ++ P   R    +P  P  +    E YS +L  LA K+L  +++A+ ++   + +   +  Q + +NYYP CPQP L +GL  H+D G +T+LLQ +++ GLQ  +D    W+ ++ +  AF++N+GD
Sbjct:   98 EKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGD 259          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.729e-18
Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = -1
Query:  156 VVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 605
            V +E    DW   F +  LP  +        L   ++  ++ ++ EL  LA ++L  + + L ++   +K +F   +G     +++ YPPCP+P+L+ GL  H+DAGGL +L Q +++ GL + KDG WV +  +  + +IN+GD LEVI  G
Sbjct:   78 VETEINDTDWESTFFLRHLP--VSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNG 228          
The following BLAST results are available for this feature:
BLAST of DN617500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
GAO1B_WHEAT1.674e-1831.61Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FL3H_DIACA1.674e-1831.90Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
GAO1A_WHEAT2.186e-1831.61Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FL3H_MALDO2.186e-1831.29Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO_DIACA2.186e-1831.06Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO4_PETHY2.186e-1832.481-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO2_SOLLC2.186e-1832.001-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
GAO1D_WHEAT2.855e-1831.61Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
FL3H_MATIN2.855e-1830.67Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO3_CUCME3.729e-1832.681-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617500 ID=DN617500; Name=DN617500; organism=Citrus sinensis; type=EST; length=662bp
TAAGGATTCAATAATTAAAATAAGTTTCAACAAACACCCTCTTGAAGAAA
TCATTAAAAGAGTTTGCATATTCGAAAAATCGAATCAAATTTGAAACCTT
AACTTTGATACCATATTGGATAAACCTCTTGGCCAAAAACTTATAGCAAG
TGACAGCCATAAACTATTACCTCCAAAGCATCACCAATGTTGATAATAAA
AGCATCAGGGAGGGCTTTAATAGGAACCCATAATCCATCTTTCTTTATTT
GAAGGCCATCCATCTCATTGATTTGGAGGAGGATGGTTAGACCTCCGGCA
TCAGAATGAGGAGTAAGGCCCATAACAAGCTTCGGCTGGGGACACGGAGG
ATAGTAATTCATCCTCATTATTTGCACTCCTTCTTCAAACAAATCTTTGA
TATCGTTGGGATCCATTTTTAGAGCTTTTGCCATTTGGTAAAGAATTTTC
AAGGCAAGATTTCTAAGTTCTGCTGAGTAAGATTCCAAGGTATCTCTGAA
ATGGACAGGCAACTTGGGAAATAGATGGGGCTTCCTCAAATAAGTTGGAA
GAGTGTACATAGCAAACATATCTGCCCAATCAAGCTTCTGCTCCTCAGAC
ACAACAAAAGCCTGCCCAAATCCCTGAATATCGCCTGGTTGCTGCCAATA
CTTCTTTTTCTC
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