DN617500

Overview
NameDN617500
Unique NameDN617500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.385e-17
Identity = 59/182 (32.42%), Postives = 95/182 (52.20%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWAD--MFAMYTLPTYLRKPHLFPKLPV---HFRDTLESYSAELRNLALKILYQMAKALKMDPNDI------KDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGDALEVIVYG 662
            EK +  ++PGD  G+G   + S   K  W++   F+   L + LRK  L+PK      HF   +E +  E+R LA K+L     AL +    +      + + E     M +N+YP CP PK  +GL  H+D+G  T +LQ + + GLQ+ + G   WV + A+P A ++N+GD  +++  G
Sbjct:  102 EKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.385e-17
Identity = 59/182 (32.42%), Postives = 95/182 (52.20%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWAD--MFAMYTLPTYLRKPHLFPKLPV---HFRDTLESYSAELRNLALKILYQMAKALKMDPNDI------KDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGDALEVIVYG 662
            EK +  ++PGD  G+G   + S   K  W++   F+   L + LRK  L+PK      HF   +E +  E+R LA K+L     AL +    +      + + E     M +N+YP CP PK  +GL  H+D+G  T +LQ + + GLQ+ + G   WV + A+P A ++N+GD  +++  G
Sbjct:  102 EKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.033e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = -1
Query:  156 VSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIM-----RMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 602
            V +   +DW   F +  LP  +      P L    R  ++ ++ +L  LA ++L  + + L ++   +K  F      +     +++ YPPCP+P+L  GL  H+DAGGL +L Q + + GLQ+ KDG WV +  +  + +IN+GD +EVI  G
Sbjct:   77 VVDANDMDWESTFFIRHLP--VSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNG 228          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.185e-17
Identity = 59/182 (32.42%), Postives = 94/182 (51.65%), Query Frame = -1
Query:  156 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWAD--MFAMYTLPTYLRKPHLFPKLPV---HFRDTLESYSAELRNLALKILYQMAKALKMDPNDIK------DLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGDALEVIVYG 662
            EK +  ++PGD  G+G   + S   K  W++   F+   L + LRK  L+PK      HF   +E +  E+R LA K+L     AL +    +        + E     M +N+YP CP PK  +GL  H+D+G  T +LQ + + GLQ+ + G   WV + A+P A ++N+GD  +++  G
Sbjct:  102 EKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.200e-16
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = -1
Query:  165 VSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQ--IKKDGLWVPIKALPDAFIINIGDALEVI 602
            +S E+ L W D  A    P      + +P+ P  +R+ +  YS E+R L +++L  + + L +      +   + +Q+M  NYYPPCP P   +G   H D   +T+L Q  ++ GLQ  I KD  W+ ++ +P AF++N+G  L+VI
Sbjct:  120 LSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELSQ-IQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ--DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVI 264          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.046e-16
Identity = 51/175 (29.14%), Postives = 93/175 (53.14%), Query Frame = -1
Query:  156 KKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTY-LRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIK-----DLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGL-WVPIKALPDAFIINIGDALEVIVYG 659
            K K  +    + G+G A + S   K  W++ F +   P +  RK  L+P   + + + +E Y   ++ LA K+++    +L ++  DI+       F+    ++++N+YP CP+P   MGL  H+D+  +TIL Q N   GLQ+ +D + WV    +P + ++N+GD L ++  G
Sbjct:  104 KLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQ-NNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNG 275          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 47/163 (28.83%), Postives = 87/163 (53.37%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            +K +Y    G   GF  +  +  E   DW ++   ++ P   R    +P+ P  +   +E YS  L  L+  ++  +++A+ ++   +     +  Q + +N+YP CPQP L +GL  H+D G +T+LLQ + + GLQ  +DG   W+ ++ +  AF++N+GD
Sbjct:  102 DKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAFVVNLGD 263          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = -1
Query:  156 IQGFGQAFVVSEEQKLDWADMFAMYTLPTY-LRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIK------DLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGL-WVPIKALPDAFIINIGDALEVIVYG 629
            + G+G A + S   K  W++ F +   P    RK  L+P+  +++ D +E Y   ++ LA K+++    +L +   DI+      DL       +++N+YP CP+P   MGL  H+D+  LTIL Q N   GLQ+ +D L WV +   P + ++N+GD   ++  G
Sbjct:  121 VSGYGVARIASFFNKQMWSEGFTITGSPLNDFRK--LWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDL-NWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQ-NNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNG 282          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 46/153 (30.07%), Postives = 80/153 (52.29%), Query Frame = -1
Query:  156 VVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 605
            + +E   +DW   + +  LP         P L   +R  ++ ++  L  LA  +L  + + L ++   +K  F   +G     ++  YPPCP+  L+ GL  H+DAGG+ +L Q +++ GLQ+ KD  W+ +  +  + +IN+GD LEVI  G
Sbjct:   77 IQAEVTDMDWESTYFLRHLPQ--SNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNG 227          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = -1
Query:  171 TLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALE 491
            T+E +++E   LA  +   +A+    + +  K+        +RMN YPPCP+P  V GL PH+D+  LTIL Q +++ GLQ+ KD  W+ +K  P A IINIGD  +
Sbjct:  154 TMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQ-DQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQ 259          
The following BLAST results are available for this feature:
BLAST of DN617500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
G3O23_WHEAT5.385e-1732.42Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT5.385e-1732.42Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
ACCO_PERAE7.033e-1731.821-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
G3O21_WHEAT9.185e-1732.42Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
HY6H_HYONI1.200e-1632.43Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
G3OX2_ARATH2.046e-1629.14Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FL3H_HORVU2.672e-1628.83Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
G3OX1_ARATH1.732e-1531.33Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO_DIOKA1.732e-1530.071-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G2OX8_ARATH5.040e-1539.25Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617500 ID=DN617500; Name=DN617500; organism=Citrus sinensis; type=EST; length=662bp
TAAGGATTCAATAATTAAAATAAGTTTCAACAAACACCCTCTTGAAGAAA
TCATTAAAAGAGTTTGCATATTCGAAAAATCGAATCAAATTTGAAACCTT
AACTTTGATACCATATTGGATAAACCTCTTGGCCAAAAACTTATAGCAAG
TGACAGCCATAAACTATTACCTCCAAAGCATCACCAATGTTGATAATAAA
AGCATCAGGGAGGGCTTTAATAGGAACCCATAATCCATCTTTCTTTATTT
GAAGGCCATCCATCTCATTGATTTGGAGGAGGATGGTTAGACCTCCGGCA
TCAGAATGAGGAGTAAGGCCCATAACAAGCTTCGGCTGGGGACACGGAGG
ATAGTAATTCATCCTCATTATTTGCACTCCTTCTTCAAACAAATCTTTGA
TATCGTTGGGATCCATTTTTAGAGCTTTTGCCATTTGGTAAAGAATTTTC
AAGGCAAGATTTCTAAGTTCTGCTGAGTAAGATTCCAAGGTATCTCTGAA
ATGGACAGGCAACTTGGGAAATAGATGGGGCTTCCTCAAATAAGTTGGAA
GAGTGTACATAGCAAACATATCTGCCCAATCAAGCTTCTGCTCCTCAGAC
ACAACAAAAGCCTGCCCAAATCCCTGAATATCGCCTGGTTGCTGCCAATA
CTTCTTTTTCTC
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