DN617500

Overview
NameDN617500
Unique NameDN617500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.583e-15
Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = -1
Query:  156 GQAFVVSEEQKLDWADMFAM-YTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 617
            G AF    E+   W D+  + Y LP+   K   +P  P   R+ + +Y++  R +A++IL  + + L + P+        G  ++ +NYYPP P P   +GL PH D   +T+LL    + GL+I   G W+ ++ +P++ +IN G  LEV+  G
Sbjct:  108 GSAFETLGEKY--WIDVLELLYPLPSGDTKD--WPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP-GAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNG 257          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14
Identity = 35/122 (28.69%), Postives = 67/122 (54.92%), Query Frame = -1
Query:  156 FPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 521
            +P  P   RD +E ++++ R++  ++L  + + + +  +  +     G  I+ +N+YP CP P   +G  PH D   +T+LL    ++GL++   G W+ +   P+AF++N G  LEV+  G
Sbjct:  138 WPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNG 258          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 50/185 (27.03%), Postives = 83/185 (44.86%), Query Frame = -1
Query:  156 EKKKYWQQP--GDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQI--------------MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            +K+ Y   P  G +QG+G     +   + +W D       P  L    L+P  P  +      +    R+LA  +L  ++  L     D  D  E+ +                +++NYYP CPQP+L +G+  H+D   L+ +L  N + GLQ+     WV  +  P   I+++GDALE++  G
Sbjct:  122 DKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLL--GTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILH-NGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNG 303          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = -1
Query:  165 LPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVI 512
            LP    + +  YS E+  LA  +   +++AL + PN +K++       M  + +PPCP+P    G   H+D   LTILL  N   GLQ+  DG W+ +   P+A I N+GD L++I
Sbjct:  163 LPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLI 277          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13
Identity = 47/166 (28.31%), Postives = 86/166 (51.81%), Query Frame = -1
Query:  156 IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIK---DLFEEGVQI----MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQI-KKDGLWVPIKALPDAFIINIGDALEVIVYG 629
            + G+G+  +    +K  W++ F +           L+P     +   ++ Y  E+  LA ++LY +  +L +   DI+    L + G ++    +R+N+YP CP+P+  MGL  H+D+  LTIL Q N   GLQ+ +++  WV ++  P   ++NIGD   ++  G
Sbjct:  113 VSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNG 277          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13
Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = -1
Query:  156 PGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHL--FPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPND-----IKDLFEEGVQIMRMNYYPPCPQPKLV----MGLTPHSDAGGLTILLQINEMDGLQI-KKDGLWVPIKALPDAFIINIGDALEVIVYG 638
            P D  G+G   +      + W +   + T P  +    L  F + P HFR  +E+Y   ++N+   +L  MA+ L +   +     +KD  E+     R+N+YPPCP+ + +    +G   H+D   +++L + N   GLQI   DG WV +     +F IN+GDAL+V+  G
Sbjct:   86 PPDPFGYGSKRI-GPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKD--EKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVL-RSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNG 254          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = -1
Query:  156 FRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQ---IMRMNYYPPCPQPKL----VMGLTPHSDAGGLTILLQINEMDGLQIK-KDGLWVPIKALPDAFIINIGDALEVIVYG 500
            FR  L+ Y   +RN+A +IL  MA+ LK+ P ++        Q   + R+N+YP CP+  +    ++G   H+D   ++IL + N   G QI  +DG W+ +     +F IN+GD+L+V+  G
Sbjct:  129 FRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISIL-RSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNG 250          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11
Identity = 43/130 (33.08%), Postives = 74/130 (56.92%), Query Frame = -1
Query:  156 LFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF---EEGVQIMRMNYYPPCPQP--KLV-MGLTPHSDAGGLTILLQINEMDGLQI-KKDGLWVPIKALPDAFIINIGDALEVIVYG 524
            +F + P  FR+++E Y  E++ ++ K+L  +A+ L ++P D        E+    +R+N+YP   +   K+V +G   H+D   +++L + N   GLQI  KDG WV +     +F IN+GDAL+V+  G
Sbjct:  129 VFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVL-RSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNG 257          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = -1
Query:  156 LFPKL---PVHFRDTLESYSAELRNLALKILYQMAKALKMDP-NDIKDLFEEGV--QIMRMNYYPPCPQP-------KLVMGLTPHSDAGGLTILLQINEMDGLQIK-KDGLWVPIKALPDAFIINIGDALEVIVYG 524
            LFP L   P  FR+ LE Y+  +R +   +L ++   L + P N +  L  +     I+R+N+YPPCP         K V+G   H+D   +++L + N   GLQI   DG W+ +     +F  N+GD+L+V+  G
Sbjct:  112 LFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVL-RSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNG 247          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11
Identity = 49/174 (28.16%), Postives = 84/174 (48.28%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRK------PHLFPKLPV-HFRDTLESYSA---ELRNLALKILYQMAKALKMDPND---IKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGD 662
            EK++  ++ G+  G+  +F      KL W +  +         +       +L  KL   H R   E YS    E+  L+L+++  + ++L +  +     +  F+    IMR+NYYP C +P   +G  PH D   LTIL Q + + GL++  +G W  I+  P A ++N+GD
Sbjct:  103 EKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQ-DHVGGLEVWAEGRWRAIRPRPGALVVNVGD 275          
The following BLAST results are available for this feature:
BLAST of DN617500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
IDS2_HORVU6.583e-1531.61Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
IDS3_HORVU3.267e-1428.692'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
LDOX_MAIZE5.572e-1427.03Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
GSL_ARATH8.047e-1335.34Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G3OX4_ARATH8.047e-1328.31Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G2OX_PHACN8.047e-1330.06Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX1_PEA1.518e-1133.33Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
G2OX2_ARATH3.381e-1133.08Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX1_ARATH3.381e-1132.85Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
GAOX1_ORYSJ5.767e-1128.16Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617500 ID=DN617500; Name=DN617500; organism=Citrus sinensis; type=EST; length=662bp
TAAGGATTCAATAATTAAAATAAGTTTCAACAAACACCCTCTTGAAGAAA
TCATTAAAAGAGTTTGCATATTCGAAAAATCGAATCAAATTTGAAACCTT
AACTTTGATACCATATTGGATAAACCTCTTGGCCAAAAACTTATAGCAAG
TGACAGCCATAAACTATTACCTCCAAAGCATCACCAATGTTGATAATAAA
AGCATCAGGGAGGGCTTTAATAGGAACCCATAATCCATCTTTCTTTATTT
GAAGGCCATCCATCTCATTGATTTGGAGGAGGATGGTTAGACCTCCGGCA
TCAGAATGAGGAGTAAGGCCCATAACAAGCTTCGGCTGGGGACACGGAGG
ATAGTAATTCATCCTCATTATTTGCACTCCTTCTTCAAACAAATCTTTGA
TATCGTTGGGATCCATTTTTAGAGCTTTTGCCATTTGGTAAAGAATTTTC
AAGGCAAGATTTCTAAGTTCTGCTGAGTAAGATTCCAAGGTATCTCTGAA
ATGGACAGGCAACTTGGGAAATAGATGGGGCTTCCTCAAATAAGTTGGAA
GAGTGTACATAGCAAACATATCTGCCCAATCAAGCTTCTGCTCCTCAGAC
ACAACAAAAGCCTGCCCAAATCCCTGAATATCGCCTGGTTGCTGCCAATA
CTTCTTTTTCTC
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