DN617491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPN (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQTLIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30 Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 T L Q L + F N F T ++ + L A Q ++G+ D + + P L S+ SVG D DV ++G+ + +TP VLT+ VAD + LML+ RR+ E V++G+W++ GD KT+GI+G+GRIGMA+A+RA FS P+ Y SR + ++ + S+ L + L + P+TE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIA 248
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_PECCP (Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.633e-29 Identity = 84/228 (36.84%), Postives = 122/228 (53.51%), Query Frame = 1 Query: 106 RFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGA--DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG---DYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762 R L + +TV++ F + G +G D + + P+L S+ SVG D +V EKGV + +TP VLT+ VAD + LMLA RR+ E V++G+WK G D+ T KT+GI+G+GRIG+AVA+RA FS P+ Y +R + ++ + + L + L + PLT ET H+I RE + + P +LINIGRG VDE L Sbjct: 16 RARLDQHFTVTELDAFPSLDHPALATAEGIIGSGGKVDKDFLQHAPRLRAASTISVGYDTFNVDALNEKGVILMHTPTVLTETVADTVLALMLASARRVVEVAERVKAGEWKGGVDSDW-FGTDVHHKTIGILGMGRIGLAVAQRAHFGFSMPVLYNARRHHAEAEQRFNARHCDLDTLLAESDFLCITLPLTTETHHLIGREQLAKMKPSAILINIGRGAVVDEDAL 242
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.633e-29 Identity = 75/195 (38.46%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 211 DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTG-----KTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768 DAE + PKL + SS SVG D DVA ++GV + +TP VLT+ VAD + L+L+ RR+ E V+SG+W+ +++ + G K +GI+G+GRIG+A+A+RA F PI Y +R + ++ Y + L + L ++ PLTE+T H+I RE + + +LIN GRGP VDE+ L++ Sbjct: 57 DAEFLRQAPKLRVASSISVGYDNFDVAALNDRGVLLMHTPTVLTETVADTMMALVLSSARRVVEMAERVKSGEWRG---SISSDWFGIDVHHKKLGILGMGRIGLALAQRAHLGFGMPILYNARKHHDEAEQRFDAEYCDLDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIA 248 The following BLAST results are available for this feature:
BLAST of DN617491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617491 ID=DN617491; Name=DN617491; organism=Citrus sinensis; type=EST; length=768bpback to top |