DN617491

Overview
NameDN617491
Unique NameDN617491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: SERA_SCHPO (Putative D-3-phosphoglycerate dehydrogenase OS=Schizosaccharomyces pombe GN=SPCC364.07 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15
Identity = 61/237 (25.74%), Postives = 108/237 (45.57%), Query Frame = 1
Query:   43 ESIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTE-KPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 750
            E I +L+   +N      L+      +F   S     L  +   + A+   +       +++A   L ++  F +G ++VD+    E+G+ V N+P   +  VA+L IG ++++ R++ +    +  G+W K       +  GKT+GIIG G IG  ++  AEA    + YY      P    K   S+ EL      + +  P + ET+++I+ +   A+     LIN  RG  VD
Sbjct:   54 EDIKILLLENVNQSALSNLKDEGYQVEFLKTSMSEDDLVEKIKGVHAIGIRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAELVIGYIISLARQVGDRSLELHRGEWNKVS-SGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDILPIMPLGSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAAMKEGSYLINASRGTVVD 289          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15
Identity = 53/189 (28.04%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  202 AGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWK-KGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTE-----KPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 750
            A   AE I     LE++ +  +G D +D+      G+ V       T  VA+  +  +L +LR      + V  G+W   G         GKTVG +G GRIG  + +R + F+C + Y+ R +     +  +  KY   +  +   C ++V+  PLTE+TR + N+E I  +    +++N  RG  +D
Sbjct:   99 AYVSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKIDPELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMD 287          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.484e-14
Identity = 61/195 (31.28%), Postives = 93/195 (47.69%), Query Frame = 1
Query:  187 VGNATAGADAELIDALPKLEI--VSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            VG+ +  ++A ++ AL K+ +  +S+ S+G + +D    +  G+ V  T     D VAD A+ LML  +R    +   V    ++  D     +    TVG+IG G IG AV KR   F C +  Y  + K    Y     + EL  N  I+ +  PL  +TRH+I +  I  +     LIN GRG  VD   L+
Sbjct:   54 VGHKSEVSEATIL-ALRKVGVKYISTRSIGCNHIDTTAAERMGISV-GTVAYSPDSVADYALMLMLMAIRGAKSTIHAVAQQNFRL-DCVRGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYDNSRKIEADYV---QLDELLKNSDIVTLHVPLCADTRHLIGQRQIGEMKQGAFLINTGRGALVDTGSLV 242          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 48/172 (27.91%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  241 LEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYK--YYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 750
            ++IV+    G + VD+   +E G++V   P    + VA+  IGLM+ + RR+  + +  R   +   +  +     G+TVG+IG G+IG+AV +  + F   I  Y   + P ++     Y  + EL +  H++ + CP T E  H++N E    +    +++N  RG  +D
Sbjct:   69 VKIVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSL-EGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEELGGQYVELDELYAKSHVITLHCPATPENYHLLNCEAFAKMKDGVMIVNTSRGSLID 239          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: SERA_DICDI (D-3-phosphoglycerate dehydrogenase OS=Dictyostelium discoideum GN=serA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  217 ELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK-PNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRG 738
            +++    +L  +  F +G D+VD+ + +++GV V N+P   +  VA+L I  ++ + R+L +    + +  W+K +     +  GKT+GIIG G IG  ++  AEA    + YY    + P    K  P +  L  N + + +  P T+ET  +I  E I+ +     L+N  RG
Sbjct:   68 KILSEAKRLLAIGCFCIGTDQVDLIEAEKRGVPVFNSPFCNSRSVAELIICEIITLSRKLGDRSTEMHNKIWRK-ESANCHEIRGKTLGIIGYGHIGSQLSVLAEAMGMSVLYYDIARRLPLGNSKMCPDMKTLLENSNFVTLHVPDTKETVGLIGEEEINTMKKGSYLLNASRG 241          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 50/190 (26.32%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  214 AELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWK-KGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK-PNLKY----KYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            AE I     L+++ +  +G D +D+      G+ V          VA+  +  +L ++R        V  G+W   G         GKT+G +G GRIG  + +R + F C + Y+ R +  P L+     K+   + E+   C ++V+  PLTE+TR + N+E+I  L    +++N  RG  ++ + ++
Sbjct:  111 AERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVV 300          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: CTBP1_HUMAN (C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13
Identity = 52/192 (27.08%), Postives = 89/192 (46.35%), Query Frame = 1
Query:  217 ELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKL------TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY----SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            E ++    L I+     G D +D+    + G+ V N P    ++ AD  +  +L + RR     + +R G   +   ++        +  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   +  L  +   ++ +L  +   + + C L E   H+IN   +  +     L+N  RG  VDE+ L
Sbjct:   84 EDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKAL 275          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: CTBP1_RAT (C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 52/192 (27.08%), Postives = 89/192 (46.35%), Query Frame = 1
Query:  217 ELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKL------TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY----SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            E ++    L I+     G D +D+    + G+ V N P    ++ AD  +  +L + RR     + +R G   +   ++        +  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   +  L  +   ++ +L  +   + + C L E   H+IN   +  +     L+N  RG  VDE+ L
Sbjct:   73 EDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKAL 264          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: CTBP1_MOUSE (C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 52/192 (27.08%), Postives = 89/192 (46.35%), Query Frame = 1
Query:  217 ELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKL------TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY----SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            E ++    L I+     G D +D+    + G+ V N P    ++ AD  +  +L + RR     + +R G   +   ++        +  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   +  L  +   ++ +L  +   + + C L E   H+IN   +  +     L+N  RG  VDE+ L
Sbjct:   84 EDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKAL 275          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: LDHD_TREPA (D-lactate dehydrogenase OS=Treponema pallidum GN=ldhD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 47/177 (26.55%), Postives = 86/177 (48.59%), Query Frame = 1
Query:  238 KLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK-YKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            KL+++S+ + G D  +    K+ G+R+TN P    + + + A+   L + R   E + +VR   ++     L+ +     VGI+G GRIG A A+  +     +  +        K +  Y S+ EL S   ++ +  P T+++ H+IN + I  +     L+N  RG  +D + LL
Sbjct:   69 KLKVLSTRTAGFDMYNATLLKKHGIRLTNVPSYSPNAIGEYALAAALQLTRHAREIETFVRKRDFRWQKPILSKELRCSRVGILGTGRIGQAAARLFKGVGAQVVGFDPYPNDAAKEWLTYVSMDELLSTSDVISLHMPATKDSHHLINAKTIAQMKDGVYLVNTARGAVIDSQALL 245          
The following BLAST results are available for this feature:
BLAST of DN617491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
SERA_SCHPO6.661e-1525.74Putative D-3-phosphoglycerate dehydrogenase OS=Sch... [more]
FDH1_ORYSJ8.699e-1528.04Formate dehydrogenase 1, mitochondrial OS=Oryza sa... [more]
VANH_ENTFA1.484e-1431.28D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
DDH_HAEIN3.306e-1427.912-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
SERA_DICDI5.639e-1428.57D-3-phosphoglycerate dehydrogenase OS=Dictyosteliu... [more]
FDH_ARATH5.639e-1426.32Formate dehydrogenase, mitochondrial OS=Arabidopsi... [more]
CTBP1_HUMAN1.256e-1327.08C-terminal-binding protein 1 OS=Homo sapiens GN=CT... [more]
CTBP1_RAT1.641e-1327.08C-terminal-binding protein 1 OS=Rattus norvegicus ... [more]
CTBP1_MOUSE1.641e-1327.08C-terminal-binding protein 1 OS=Mus musculus GN=Ct... [more]
LDHD_TREPA2.143e-1326.55D-lactate dehydrogenase OS=Treponema pallidum GN=l... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617491 ID=DN617491; Name=DN617491; organism=Citrus sinensis; type=EST; length=768bp
GGAAAATCCAACGTGGGTTCATTTTGTGATTTCAGTTGAATGGAGTCAAT
CGGTGTCTTGATGGCCTGTCCCATGAACACGTACTTAGAGCAGGAACTCG
AGAGAAGATTCAATCTTTTCAAGTTCTGGACGGTTTCAGACAAAACCCAG
TTCCTAAAAGCACAACAAAACAACATACGTGCGGTTGTCGGGAACGCGAC
GGCCGGTGCTGACGCTGAACTGATTGATGCTTTACCTAAGCTTGAGATTG
TATCGAGTTTTAGTGTGGGATTGGACAAGGTTGACGTGGCCAAGTGCAAA
GAAAAGGGCGTTAGAGTTACTAACACCCCTGATGTGTTGACTGATGACGT
GGCCGATTTGGCCATTGGGTTGATGTTGGCTGTGTTGAGGAGGTTGTGTG
AGAGCGATAGGTATGTCAGAAGTGGGAAGTGGAAGAAGGGGGATTATAAG
CTGACCACTAAGTTCACTGGAAAAACAGTTGGCATTATTGGGCTAGGAAG
AATTGGCATGGCAGTTGCTAAGAGAGCTGAAGCATTTAGCTGCCCAATCA
ACTACTACTCTAGAACAGAGAAACCAAATTTGAAATACAAATACTACCCT
AGTGTAGTTGAGTTGGCCTCCAACTGTCACATTCTGGTCGTTGCATGCCC
ACTAACGGAAGAGACCCGCCATATCATTAATCGTGAAGTCATTGATGCTT
TGGGACCAAAAGGTGTTCTCATCAACATTGGGAGGGGTCCTCACGTGGAT
GAACGTGAACTGTTGTCT
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