DN617491

Overview
NameDN617491
Unique NameDN617491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2408 contig Csv1_Contig2408:46..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.339e-23
Identity = 74/211 (35.07%), Postives = 108/211 (51.18%), Query Frame = 1
Query:  139 DKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            D+ + L A       +V +AT   DAE++ A PKL+IV+   VGLD VDV     +GV V N P       A+ A+ L+LA  R++  +D  +R   WK+  +  T  F GKTVG++GLGRIG  VA+R  AF   +  Y     P    +      S+ +L +    + V  P T ET  +I++E +    P  +++N  RG  VDE  L
Sbjct:   33 DRDKLLAAVPEADALLVRSATT-VDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIF-GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAAL 241          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: Y606_STAS1 (Putative 2-hydroxyacid dehydrogenase SSP0606 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0606 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.749e-23
Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  154 LKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRS---GKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINY---YSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            LK    +  A++   +   D E+IDA   L+I++++  G + VD+   +++ + VTNTP   T+  A+L   L+LAV RR+ E D+  R+     W    ++   + +GKT+GIIGLG IG AVA+RA+AF   I Y   + + +K       Y  +  L  N   + +         H I++   + + P   LIN  RGP V E+ L+
Sbjct:   39 LKQGVKDADALISLLSTSVDKEVIDAANNLKIITNYGAGFNNVDIDYARQQNIDVTNTPKASTNSTAELTFALVLAVARRIPEGDKLCRTTGFDGWAPLFFR-GREVSGKTIGIIGLGEIGSAVARRAKAFDMNILYTGPHQKVDKEREIGAKYVDLETLLKNADFVTINAAYNPSLHHQIDKAQFEMMKPTSYLINASRGPIVHEKALV 247          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GRHPR_MOUSE (Glyoxylate reductase/hydroxypyruvate reductase OS=Mus musculus GN=Grhpr PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.896e-23
Identity = 64/191 (33.51%), Postives = 107/191 (56.02%), Query Frame = 1
Query:  211 DAELIDAL-PKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD--YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCP-INYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            D +L+DA    L ++S+ SVG+D + + + K++G+RV  TP VLTD  A+LA+ L+L   RRL E+   V++G W      +      +  TVGI+GLGRIG A+A+R + F      Y  R  +P    ++   +  + +LA+    +VV+C LT +T  + +++    +    + INI RG  V++ +L
Sbjct:   64 DKKLLDAAGANLRVISTLSVGVDHLALDEIKKRGIRVGYTPGVLTDATAELAVSLLLTTCRRLPEAIEEVKNGGWSSWSPLWMCGYGLSQSTVGIVGLGRIGQAIARRLKPFGVQRFLYTGRQPRPQEAAEFQAEFVPIAQLAAESDFIVVSCSLTPDTMGLCSKDFFQKMKNTAIFINISRGDVVNQEDL 254          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.088e-23
Identity = 65/200 (32.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  181 AVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY------SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            A+V  +    DAE+I A   L+I+    VG+D +D+    ++G+ V N P   T   A+ AI LMLA  R++ ++DR V+ GKW++  + +  +  GKT G+IGLGR+G  VAKR +A    +  Y       R E+  +K   + +   L ++  ++ V  P T+ET  +I +   + +    +++N  RG  VDE  L
Sbjct:   44 AIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKF-MGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPFVSKERAEQIGVKLVDFDT---LLASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARGGIVDEAAL 239          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: PTXD_PSEST (Phosphonate dehydrogenase OS=Pseudomonas stutzeri GN=ptxD PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.134e-22
Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 1
Query:  211 DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGK---WKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSR----TEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768
            DA+ + A P+L +V     G D  DV  C  +GV +T  PD+LT   A+LAIGL + + R L  +D +VRSG+   W+   Y   T     TVGI+G+G IG+A+A R + +   + Y+      T+          +  EL ++   +++A PL  +T+H++N E++  + P  +L+N  RG  VDE  +L+
Sbjct:   58 DADFLQACPELRVVGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGEFQGWQPQFY--GTGLDNATVGILGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTQHLVNAELLALVRPGALLVNPCRGSVVDEAAVLA 248          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: TKRA_DICDI (Probable 2-ketogluconate reductase OS=Dictyostelium discoideum GN=tkrA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.480e-22
Identity = 72/224 (32.14%), Postives = 111/224 (49.55%), Query Frame = 1
Query:  145 TQFLKAQQNNIRAV-----VGNATAGA----DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWK----KGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            TQF     NNI+         N   G+    D  ++   P LE VS+ SVG D  D+    ++ + + +TP+VL D +AD+ +GLM+ V R+L   D+ +R+G+W     K  + L      K VGIIG+GRIG  +AKR    F   + YYSR+    ++  Y   +  +  + S    + V  P ++ET+H  +      +    + IN GRG  VDE  L+
Sbjct:   35 TQFEPINSNNIQEFYEAIKTANGLIGSVFKIDENVLSKAPFLECVSAISVGYDNYDLVVLNDRKIPLMHTPNVLNDSMADIMMGLMITVARKLAYCDKRMRNGEWNGPLDKSWFGLEVHH--KKVGIIGMGRIGEVLAKRCRMGFDMEVAYYSRSRHLKVEELYDAKHQDLDTILSTSDFICVVLPGSQETKHFFSFGQFSKMKNSAIFINAGRGMTVDEVALI 256          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.525e-22
Identity = 59/186 (31.72%), Postives = 104/186 (55.91%), Query Frame = 1
Query:  217 ELIDALPK-LEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD--YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY-----SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 750
            E+ID +P+ ++ +S++S+G D +D+  CK +G++V N P  +T   A++A+ L+L   RR  E ++ +R+  W   +    +  K   KT+GI G G IG A+AKRA+ F   I+Y+     S +++ + +  ++ S+  L S      +  P T ETR+  N+  I +L    +++N  RG  VD
Sbjct:   61 EVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVD 246          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: YEAA_SCHPO (Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Schizosaccharomyces pombe GN=SPACUNK4.10 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21
Identity = 73/248 (29.44%), Postives = 121/248 (48.79%), Query Frame = 1
Query:   55 VLMACPMNTYLEQELERRFNLFKFWTVSDKTQFL---KAQQNNIRAVVGNATAGA-----DAELIDALP-KLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYK--YYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            +L+    + + E E   ++   K ++   +  FL   K +  N++A+     +       D E+ID LP  ++ +     G + VDVA C  +G++V++ P  + D  AD+ I LML  LR   +    +    W   + K +    GKT+GI+GLG IG  +AKRA AF   I Y++RT  P  + +   + S  +L +   +L +  PL   TRHII +     +    V++N  RG  +DE  L+
Sbjct:   10 LLVGTLKHAHKEWEALGKYAELKTYSDGTREDFLAKCKTEFQNVKAICRTYNSKFYMGIFDKEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALRGFNQGIFELHKNNWN-ANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPEEEAEGAEFVSFDDLLAKSDVLSLNLPLNAHTRHIIGKPEFQKMKRGIVIVNTARGAVMDEAALV 256          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 6.220e-21
Identity = 64/190 (33.68%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  217 ELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY------SRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGV-LINIGRGPHVDERELL 765
            +L + +  L+IV    VG+D +D+ +  + GV V N P+  T   A+    ++ +++R + +++  V+S +W +  Y + ++  GKT+GI+GLGRIG  +A+RA AF   ++ +       R +K  +  + +  V+E A    I+ V  PLT+ET+ ++N+E I A   KGV LIN  RG  +DE  LL
Sbjct:   55 DLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAY-VGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDPFLTEERAKKIGVNSRTFEEVLESAD---IITVHTPLTKETKGLLNKETI-AKTKKGVRLINCARGGIIDEAALL 239          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: YOAD_BACSU (Putative 2-hydroxyacid dehydrogenase yoaD OS=Bacillus subtilis GN=yoaD PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20
Identity = 73/254 (28.74%), Postives = 118/254 (46.46%), Query Frame = 1
Query:   46 SIGVLMACPMNTYLEQELERRFN--LFKFWTVSDKT-------QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKF-----TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            S+ VL+  P N    +ELE  F    ++ W    +        Q LKA   N   ++       D+ +  ++P+L  V         VDVA   ++G+ V  TP      VA++ IG +++ LR    S+++++ G+W     +   KF     TGKTVG+IG G +G  +AK   AF C I YY    + +       S+  + S+  I+ V  P TEET  +I+R+  D +    + +N  R   V+  +LL
Sbjct:   11 SMTVLVTAPYNEEGRKELENLFGSVAYQSWKEQGRAYREDELIQLLKA--TNATGLITELDQVTDS-VFASVPELSFVGVCRGMPSNVDVAAASKRGIPVFYTPGRNAQAVAEMFIGNVISFLRHTSASNQWLKDGEWDSDYLQAYVKFKGNELTGKTVGMIGFGAVGQRIAKLLTAFDCKIKYYDPYIQDDHPLYEKASLKTVFSDSDIVSVHLPRTEETLGLIDRQYFDLMKESAIFVNTSRAVVVNREDLL 261          
The following BLAST results are available for this feature:
BLAST of DN617491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
SERA_MYCBO1.339e-2335.07D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]
Y606_STAS11.749e-2331.90Putative 2-hydroxyacid dehydrogenase SSP0606 OS=St... [more]
GRHPR_MOUSE3.896e-2333.51Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]
SERA_ARCFU5.088e-2332.50D-3-phosphoglycerate dehydrogenase OS=Archaeoglobu... [more]
PTXD_PSEST1.134e-2233.68Phosphonate dehydrogenase OS=Pseudomonas stutzeri ... [more]
TKRA_DICDI1.480e-2232.14Probable 2-ketogluconate reductase OS=Dictyosteliu... [more]
DHGY_HYPME2.525e-2231.72Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]
YEAA_SCHPO2.792e-2129.44Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Sc... [more]
SERA_BACSU6.220e-2133.68D-3-phosphoglycerate dehydrogenase OS=Bacillus sub... [more]
YOAD_BACSU5.265e-2028.74Putative 2-hydroxyacid dehydrogenase yoaD OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617491 ID=DN617491; Name=DN617491; organism=Citrus sinensis; type=EST; length=768bp
GGAAAATCCAACGTGGGTTCATTTTGTGATTTCAGTTGAATGGAGTCAAT
CGGTGTCTTGATGGCCTGTCCCATGAACACGTACTTAGAGCAGGAACTCG
AGAGAAGATTCAATCTTTTCAAGTTCTGGACGGTTTCAGACAAAACCCAG
TTCCTAAAAGCACAACAAAACAACATACGTGCGGTTGTCGGGAACGCGAC
GGCCGGTGCTGACGCTGAACTGATTGATGCTTTACCTAAGCTTGAGATTG
TATCGAGTTTTAGTGTGGGATTGGACAAGGTTGACGTGGCCAAGTGCAAA
GAAAAGGGCGTTAGAGTTACTAACACCCCTGATGTGTTGACTGATGACGT
GGCCGATTTGGCCATTGGGTTGATGTTGGCTGTGTTGAGGAGGTTGTGTG
AGAGCGATAGGTATGTCAGAAGTGGGAAGTGGAAGAAGGGGGATTATAAG
CTGACCACTAAGTTCACTGGAAAAACAGTTGGCATTATTGGGCTAGGAAG
AATTGGCATGGCAGTTGCTAAGAGAGCTGAAGCATTTAGCTGCCCAATCA
ACTACTACTCTAGAACAGAGAAACCAAATTTGAAATACAAATACTACCCT
AGTGTAGTTGAGTTGGCCTCCAACTGTCACATTCTGGTCGTTGCATGCCC
ACTAACGGAAGAGACCCGCCATATCATTAATCGTGAAGTCATTGATGCTT
TGGGACCAAAAGGTGTTCTCATCAACATTGGGAGGGGTCCTCACGTGGAT
GAACGTGAACTGTTGTCT
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