DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = -3
Query:  274 LKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 804
            LK+ VIK V+P KYLD+ T++HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT    ++E+L++V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ K L
Sbjct:  223 LKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.529e-49
Identity = 95/178 (53.37%), Postives = 128/178 (71.91%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D+I  DL  HVIK VIP + LD++T  ++ P+GRFVIGGP GD GLTGRKIIIDTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C ++++YAIG+  PLS+F+D++GTGK+ +++++++V ++FD RPG I  +LDL++     + K AAYGHFGR D D  WE
Sbjct:  208 DKIREDLINHVIKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.529e-49
Identity = 97/190 (51.05%), Postives = 135/190 (71.05%), Query Frame = -3
Query:  253 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKLQA 822
            +EI  D+ +HV+KPVIP+  LD+ T + + P+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+G+A +  +Q++YAIGV +P+S+ VD++GTGKI D++I++++K++FD RP  I   LDL+R     + +TAAYGHFGR D D  WE +   +  +++A
Sbjct:  208 EEIRKDIIEHVVKPVIPEHLLDENTRYFVNPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGIADKIEIQLAYAIGVAKPVSIMVDTFGTGKIADEKIVELIKKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDIDLPWERIDKAEILRMEA 394          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.019e-49
Identity = 103/187 (55.08%), Postives = 127/187 (67.91%), Query Frame = -3
Query:  262 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 822
            +++  +L + VIK VIP   +D+ T++HL P G FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV +NFD RPGMI  NLDLKR     +  TA  GHFG +  DF WE  + LK +K
Sbjct:  204 EDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.019e-49
Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = -3
Query:  274 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 822
            +E+   LK+ VI+ V+P KYLD+ T++HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT +  ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ + L
Sbjct:  216 EEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPRKL 393          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.862e-49
Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = -3
Query:  274 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 822
            +++   LK+ VI+ V+P +YLD+ TI+HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT +  ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ K L
Sbjct:  217 EDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.027e-48
Identity = 103/178 (57.87%), Postives = 127/178 (71.35%), Query Frame = -3
Query:  274 LKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDK-EILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 804
            LK+ VIK V+P KYLD+ TI+HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT K  ++ E+L++V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ K L
Sbjct:  223 LKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSKKTERDELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 395          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            +E+   + +H+IKPV+P + L D+T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E+FD RP  I   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  201 EELKNAVIEHIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 101/178 (56.74%), Postives = 125/178 (70.22%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D I  D+ +HVIKPVIP + LD KT + + P+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLAR+C VQ++YAIGV  P+SV VD++GTG IP+++I  +V + FD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  208 DTIKRDVIEHVIKPVIPAELLDSKTKYLVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARKCEVQLAYAIGVARPVSVRVDTFGTGIIPEEKIESLVNKYFDLRPAGIIKTLDLRR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.751e-48
Identity = 95/178 (53.37%), Postives = 126/178 (70.79%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++I  D+K+ VIKPV+P + LD+ T + + P+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  211 EQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 385          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_MOUSE2.069e-4957.06S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_CLOD63.529e-4953.37S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_CARHZ3.529e-4951.05S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK5_CAEEL6.019e-4955.08Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK1_HUMAN6.019e-4954.64S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN7.862e-4954.64S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_RAT1.027e-4857.87S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_NEIMB1.341e-4853.37S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_CLOTH1.341e-4856.74S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_GEOKA1.751e-4853.37S-adenosylmethionine synthetase OS=Geobacillus kau... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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