DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.639e-46
Identity = 92/178 (51.69%), Postives = 129/178 (72.47%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++I  D+K++V +PV+P + +D+KT F + P+GRFVIGGP+GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVASGLA +C +Q+SYAIGV +P S+ +D++GTGK  ++E+ +IV+++FD RP  I   LDL+R     + +TAAYGHFGR+D +  WE
Sbjct:  210 EQIHEDIKKYVFEPVLPKEMVDEKTKFFINPTGRFVIGGPNGDSGLTGRKIIVDTYGGYARHGGGAFSGKDCTKVDRSASYAARYVAKNIVASGLADKCEIQLSYAIGVAQPTSIMIDTFGTGKKSNEELTEIVRKHFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRNDLNLPWE 384          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.639e-46
Identity = 92/178 (51.69%), Postives = 127/178 (71.35%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++I  D+ +HVIK V+P+++LDD+T +++ P+GRFVIGGPHGD GLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA+G+A +  + ++YAIGV  P+S+ V+++GT KI D +I+ IV + FD RPG I  +L+LKR     + +TAAYGHFGR D +  WE
Sbjct:  205 EQIQKDIMEHVIKTVVPNEWLDDETKYYINPTGRFVIGGPHGDTGLTGRKIIVDTYGGSGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKIEIGLAYAIGVARPVSLLVNTFGTEKIEDSKIVDIVNKVFDLRPGAIIRDLELKR---PIYRQTAAYGHFGRTDVELPWE 379          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.639e-46
Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++I ADLK+HVI+ V+P   +D++T + + P+GRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRSGAY  R  AK+IVA+GLA +C VQ++YAIGV +P+S+ V+++GTGK  +  ++++V+++FD RP  I   LDL+R     + +TAAYGHFGR D    WE
Sbjct:  213 EQIQADLKEHVIEAVVPSALIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAQPVSIAVNTFGTGKAAEDVLVELVRKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDVPLPWE 387          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 94/178 (52.81%), Postives = 123/178 (69.10%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D++   + + +IKP +P + +     F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC+VQVSYAIGV +P SV V++YGTGK+ ++ + ++V ++FD RP  I   LDL R     + KTAAYGHFGRD+P+FTWE
Sbjct:  199 DQVRESVIEEIIKPTLPQELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRCLVQVSYAIGVAKPTSVMVETYGTGKVSNEILTQLVLDHFDLRPKGIVKMLDLLR---PIYAKTAAYGHFGRDEPEFTWE 373          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 95/178 (53.37%), Postives = 127/178 (71.35%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D I  ++ + VI+ VIP + L + T + + P+GRFVIGGP GDAG+TGRKII+DTY            GKDP+KVDRS AY+ R  AK+IVA+GLA +C +QV+YAIGV +P+SV VD++GTGK+ D+ I ++VK++FD RP  I   LDL R     + K+AAYGHFGR+ P+FTWE
Sbjct:  201 DTIEKEIIEKVIRAVIPAELLHEGTQYFINPTGRFVIGGPVGDAGVTGRKIIVDTYGGMGSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKCEIQVAYAIGVSQPMSVMVDTFGTGKLDDEAITELVKKHFDLRPKAIVQQLDLLR---PIYKKSAAYGHFGRELPEFTWE 375          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 95/186 (51.08%), Postives = 127/186 (68.28%), Query Frame = -3
Query:  271 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE---IVKPLK 819
            EI   L ++VI P+IP+   DD     + P+GRFV+GGP  D GLTGRKII+DTY            GKDPTKVDRS  Y  R  AK++VA+GLA + ++QV+YAIGV  P+S+ ++++GT K+ ++++ K+V+E FDFRPG I   LDL R     + KTAAYGHFGR+DPDFTWE   +V+ LK
Sbjct:  209 EIREALVKYVINPIIPENLRDDNMKILVNPTGRFVLGGPSADTGLTGRKIIVDTYGGAIPHGGGAFSGKDPTKVDRSAHYFARYVAKNVVAAGLADKFMIQVAYAIGVARPVSIMINTFGTAKVDEEKLRKVVEEIFDFRPGAIIKKLDLLR---PIYRKTAAYGHFGRNDPDFTWERTDMVRELK 391          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 92/170 (54.12%), Postives = 120/170 (70.59%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKPV+P + +     + + P+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC+VQVSYAIGV EP S+ V++YGTGK+ ++ +  +V+++FD RP  I   LDL R     + KTAAYGHFGRD+P+FTWE
Sbjct:  207 EQIIKPVLPKELIKGDIKYLVNPTGRFVVGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYATRYVAKNIVAAGLASRCLVQVSYAIGVAEPTSIMVETYGTGKVSNETLTALVRKHFDLRPKGIVNMLDLLR---PIYQKTAAYGHFGRDEPEFTWE 373          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 95/170 (55.88%), Postives = 120/170 (70.59%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP  P+  +  KT F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  209 EDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 95/170 (55.88%), Postives = 120/170 (70.59%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP  P+  +  KT F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  209 EDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.141e-46
Identity = 95/170 (55.88%), Postives = 120/170 (70.59%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP  P+  +  KT F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  209 EDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOPH1.639e-4651.69S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CLONN1.639e-4651.69S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_BACSK1.639e-4652.25S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_METFK2.141e-4652.81S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_MAGSM2.141e-4653.37S-adenosylmethionine synthetase OS=Magnetococcus s... [more]
METK_FERNB2.141e-4651.08S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_DECAR2.141e-4654.12S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_BORPE2.141e-4655.88S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA2.141e-4655.88S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR2.141e-4655.88S-adenosylmethionine synthetase OS=Bordetella bron... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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