DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHESA (S-adenosylmethionine synthetase OS=Shewanella sp. (strain ANA-3) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   + + +IKPV+P ++L+  T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V+++FD RP  ++  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  198 DLIEGVMETIIKPVLPAQWLNKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHEFN (S-adenosylmethionine synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = -3
Query:  289 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 792
            +IKPV+P ++L+  T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++++GTGK+ ++ ++K+V+++F+ RP  ++  LDL R     + +TAAYGHFGRD   F WE
Sbjct:  207 IIKPVLPAQWLNKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEVLIKLVRQHFELRPYGLTAMLDLAR---PIYQQTAAYGHFGRD--IFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            +EIA DL  ++   VI   +LD+ T + + P+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA+GLA++  VQ++YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  211 EEIAKDLHTYLFPEVIDPSFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQLAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_IDILO (S-adenosylmethionine synthetase OS=Idiomarina loihiensis GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 85/170 (50.00%), Postives = 119/170 (70.00%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKPV+P++++   T FH+ P+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLA RC +Q+SYAIGV EP S+ +D++GT K  +++++ +V+ +FD RP  +   LDL+R     + +TAAYGHFGRD  +  WE
Sbjct:  205 EEIIKPVLPEQWVSKDTQFHINPTGRFVVGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNLVAAGLAERCELQISYAIGVAEPTSISIDTFGTSKHSEEQLIALVRRHFDLRPYGLIKMLDLER---PIYKQTAAYGHFGRD--NLPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SYNS9 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9902) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = -3
Query:  283 DEIAADLKQHVIKPVIPDKYLD---DKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK---RGGNGRFLK-TAAYGHFGRDDPDFTWEIV 822
            + I  DL  HV++P   D  L    + T + + P+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VASGLA R  VQ+SYAIGV +P+S+ V+S+GTG + ++++  +V+E+FD RPG I  N  L+   +   GRF + TAAYGHFGR+D +  WE V
Sbjct:  212 ERITEDLWTHVVEPATADLNLKPSREGTKYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKALVASGLAGRAEVQLSYAIGVAKPVSILVESFGTGTVSNEDLTALVQEHFDLRPGAIIENFGLRNLPQARGGRFYQNTAAYGHFGRNDLNLPWEDV 398          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SYNR3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain RCC307) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 94/188 (50.00%), Postives = 122/188 (64.89%), Query Frame = -3
Query:  283 DEIAADLKQHVIKPVIPDKYLD---DKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK-----RGGNGRFLKTAAYGHFGRDDPDFTWEIV 822
            + I+ADL  HV++P   D  L    D T + + P+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA+GLAR+  VQ+SYAIGV +P+S+ V+S+GT    + E+ ++V  NFD RPG I  N  L+     RGGN  + + AAYGHFGR D +  WE V
Sbjct:  212 ERISADLWTHVVEPATADLSLKPSKDTTKYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKALVAAGLARKAEVQLSYAIGVAKPVSILVESFGTSSHSNDELTELVNANFDLRPGAIIENFKLRNLPQQRGGN-FYREVAAYGHFGRSDLNLPWEDV 398          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = -3
Query:  253 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKLQA 822
            + I  D+ + VIK VIP  ++DD T + + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVA+GLA++  VQ++YAIGV +P+SV +D++GT  + + +I K V++ FD RP  I   LDLKR     + +TAAYGH GR D D  WE     K +K++A
Sbjct:  208 ETIRHDVIEKVIKEVIPTSFIDDNTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAQPVSVRIDTFGTSTVSETDIEKAVRQLFDLRPAGIIKMLDLKR---PIYKQTAAYGHMGRTDIDLPWE-----KLDKVEA 389          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_STRP6 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M6 GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 92/178 (51.69%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++I  D+ + VIK VIP  YLDD T F + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA+GLA +  VQ++YAIGV +P+SV VD++GT  +P+  +   V++ FD RP  I   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  208 NQIRQDVIEKVIKAVIPADYLDDDTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLATKAEVQLAYAIGVAQPVSVRVDTFGTSTVPEAVLEAAVRQVFDLRPAGIIQMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHEON (S-adenosylmethionine synthetase OS=Shewanella oneidensis GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 88/177 (49.72%), Postives = 123/177 (69.49%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   + + +IKPV+P ++L+  T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V+++FD RP  ++  L+L R     +  TAAYGHFGR   +F WE
Sbjct:  198 DLIEGVMETIIKPVLPAQWLNKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRS--EFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SALTY (S-adenosylmethionine synthetase OS=Salmonella typhimurium GN=metK PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L+  T F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  205 EEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHESA1.436e-4249.72S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHEFN1.436e-4252.38S-adenosylmethionine synthetase OS=Shewanella frig... [more]
METK_LISW61.436e-4251.12S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_IDILO1.436e-4250.00S-adenosylmethionine synthetase OS=Idiomarina loih... [more]
METK_SYNS91.876e-4249.73S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNR31.876e-4250.00S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRU01.876e-4248.95S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_STRP61.876e-4251.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_SHEON1.876e-4249.72S-adenosylmethionine synthetase OS=Shewanella onei... [more]
METK_SALTY1.876e-4251.76S-adenosylmethionine synthetase OS=Salmonella typh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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