DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = -3 
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            ++IA DL  ++   VI   +LD+ T + + P+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA+GLA++  VQV+YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  211 EQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/177 (51.41%), Postives = 122/177 (68.93%), Query Frame = -3 
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            +I   L +  IK VIP   L++ T + + P+G+F+IGGPHGDAGLTGRKII+DTY            GKDP+KVDRS AY+ R  AK++VASGLA +C VQ++YAIGV EP+SV VD++GTGKI ++E++K ++ NF   P  I  +L L   G  ++ +TA+YGHFGR    FTWE
Sbjct:  202 QIEEALIEECIKKVIPANLLNN-TKYFINPTGQFIIGGPHGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVASGLADKCEVQLAYAIGVAEPVSVHVDTFGTGKISEEELVKRIRANFKLTPRGIIESLKLLEKGR-KYRETASYGHFGRKGSTFTWE 376
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/177 (51.41%), Postives = 122/177 (68.93%), Query Frame = -3 
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            +I   L +  IK VIP   L++ T + + P+G+F+IGGPHGDAGLTGRKII+DTY            GKDP+KVDRS AY+ R  AK++VASGLA +C VQ++YAIGV EP+SV VD++GTGKI ++E++K ++ NF   P  I  +L L   G  ++ +TA+YGHFGR    FTWE
Sbjct:  202 QIEEALIEECIKKVIPANLLNN-TKYFINPTGQFIIGGPHGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVASGLADKCEVQLAYAIGVAEPVSVHVDTFGTGKISEEELVKRIRANFKLTPRGIIESLKLLEKGR-KYRETASYGHFGRKGSTFTWE 376
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/178 (51.12%), Postives = 119/178 (66.85%), Query Frame = -3 
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            +EI  D+   VIK +IP + LDD+T + + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVA+GLA +  +Q+SYAIGV  P S+ V+++GTGK+ D E+L  +++ FD RP  I   LDL R   G   +TA+YGHFGR D +  WE
Sbjct:  211 EEIHDDVINKVIKAIIPAELLDDETKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYAPHGGGAFSGKDATKVDRSASYAARYVAKNIVAAGLADKAQIQLSYAIGVATPTSINVETFGTGKVSDDELLAAIRKVFDLRPAGIIQMLDLLRPIYG---QTASYGHFGRTDIELPWE 385
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CHLTE (S-adenosylmethionine synthetase OS=Chlorobium tepidum GN=metK PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = -3 
Query:  289 IAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGK--IPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 816
            I  D+ ++VIK VIP K +D+ T FH+ P+GRF IGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C VQVSYAIGV  P+S++++++GT K  + D++I +  +  FD RP  I    +L R     +  TAAYGHFGR+   F WE
Sbjct:  215 IKNDVIENVIKKVIPAKLIDENTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCTVQVSYAIGVARPISIYINTHGTSKHGLSDEQIQEKAEAIFDLRPLAIIRRFNLDRPHGWCYRDTAAYGHFGRE--QFPWE 390
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = -3 
Query:  289 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 792
            +IKPV+PDK+L   T F + P+GRFVIGGP GD G+TGRKII+DTY            GKDP+KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  207 IIKPVLPDKWLTKNTKFFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = -3 
Query:  289 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 792
            +IKPV+PDK+L   T F + P+GRFVIGGP GD G+TGRKII+DTY            GKDP+KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  207 IIKPVLPDKWLTKNTKFFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = -3 
Query:  289 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 792
            +IKPV+PDK+L   T F + P+GRFVIGGP GD G+TGRKII+DTY            GKDP+KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  207 IIKPVLPDKWLTKNTKFFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_ANADE (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 90/172 (52.33%), Postives = 116/172 (67.44%), Query Frame = -3 
Query:  289 LKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 804
            +++ VI   +P + +D KT   + P+GRFVIGGP GD G+TGRKII+DTY            GKDP+KVDRS AY+ R  AK++VA+GLA RC VQV+YAIGV EP+SV VD++GT K+P+ +I + V+E F   P  I   LDL R     + KTAAYGHFGR +  FTWE
Sbjct:  199 VREQVIAKALPKRLVDRKTRILINPTGRFVIGGPMGDTGVTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAARCEVQVAYAIGVAEPVSVMVDTFGTAKVPEGKIARAVREVFGLTPRAIIEGLDLLR---PVYEKTAAYGHFGRTEKTFTWE 367
[Close]
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 91/184 (49.46%), Postives = 123/184 (66.85%), Query Frame = -3 
Query:  268 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKW 819
            ++   L++ +++ VIP   LD+ T + + PSGRFVIGGP GDAGLTGRKII+D Y            GKD +KVDRS AY  R  AKS+VA+GL +R  VQ SYAIG+ EPLS+ VD+YGT    D EI++I+K+NFD RPG++   LDL R     +L TA+YGHF   + +++WE  K L++
Sbjct:  206 DLRTQLQKDIVEKVIPKDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDDEIIEIIKKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYSWEKPKKLEF 384
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LISMO1.876e-4251.12S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LEPIN1.876e-4251.41S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC1.876e-4251.41S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LACLS1.876e-4251.12S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_CHLTE1.876e-4251.12S-adenosylmethionine synthetase OS=Chlorobium tepi... [more]
METK_BUCAT1.876e-4252.38S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI1.876e-4252.38S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA51.876e-4252.38S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_ANADE1.876e-4252.33S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK2_YEAST1.876e-4249.46S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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