DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_STRS7 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 92/178 (51.69%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D+I  D+ + VIK VIP  YLD+KT F + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA+GLA +  VQ++YAIGV +P+SV VD++GT  + +  +   V++ FD RP  I   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  208 DQIRQDMIEQVIKAVIPAHYLDEKTRFLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLASKAEVQLAYAIGVAQPVSVRVDTFGTSTVSESILEAAVRQVFDLRPAGIIKMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_STREM (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 92/178 (51.69%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D+I  D+ + VIK VIP  YLD+KT F + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA+GLA +  VQ++YAIGV +P+SV VD++GT  + +  +   V++ FD RP  I   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  208 DQIRQDMIEQVIKAVIPAHYLDEKTRFLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLASKAEVQLAYAIGVAQPVSVRVDTFGTSTVSESILEAAVRQVFDLRPAGIIKMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_STRE4 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. equi (strain 4047) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 92/178 (51.69%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            D+I  D+ + VIK VIP  YLD+KT F + P+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA+GLA +  VQ++YAIGV +P+SV VD++GT  + +  +   V++ FD RP  I   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  208 DQIRQDMIEQVIKAVIPAHYLDEKTRFLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLASKAEVQLAYAIGVAQPVSVRVDTFGTSTVSESILEAAVRQVFDLRPAGIIKMLDLKR---PIYRQTAAYGHMGRTDIDLPWE 382          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHESH (S-adenosylmethionine synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   + + +IKPV+P ++L+  T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++++GTGK+ ++ ++ +V+++FD RP  ++  LDL R     +  TAAYGHFGR+  +F WE
Sbjct:  198 DLIEGVMETIIKPVLPAQWLNKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEALIALVRQHFDLRPYGLTEMLDLAR---PIYQSTAAYGHFGRN--EFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SALHS (S-adenosylmethionine synthetase OS=Salmonella heidelberg (strain SL476) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L+  T F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  205 EEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPVEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PSE14 (S-adenosylmethionine synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 94/192 (48.96%), Postives = 122/192 (63.54%), Query Frame = -3
Query:  223 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW--EIVKPLKWEKLQA*TNQG*AAGL 792
            ++K VIP   L   T FH+ P+G F+IGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P+S+ ++++GTGK+ D +I+K+V++NFD RP  I+  LDL    +  +  TAAYGHFGR   + T   +      WEK         AAGL
Sbjct:  208 IVKHVIPAHLLHKDTQFHINPTGNFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPMSISLNTFGTGKLSDDKIIKLVRDNFDLRPYAITTMLDLL---HPMYQATAAYGHFGRTPVEMTIGDDTFTAFTWEKTDRADALRAAAGL 396          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PROM1 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL1A) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 97/187 (51.87%), Postives = 124/187 (66.31%), Query Frame = -3
Query:  283 IAADLKQHVIKPV---IPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK-----RGGNGRFLK-TAAYGHFGRDDPDFTWEIV 816
            IA DL + V++P    +P K   + T F + P+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA+ LA++  VQ+SYAIGV +P+S+ VDS+GTGK+ D E+ ++V++ FD RPG I    DL+     RG  GRF + TAAYGHFGR D    WE V
Sbjct:  214 IAKDLWKFVVEPATEDLPLKPAKESTRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKALVAANLAKKVEVQLSYAIGVAKPISILVDSFGTGKVSDSELTQLVQDQFDLRPGAIIKAFDLQNLPSVRG--GRFYRDTAAYGHFGRTDILLPWEDV 398          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = -3
Query:  286 LKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEI 804
            +K+ VI   +P+  +D  T  ++  +GRFVIGGP GD GLTGRKII DTY            GKDP+KVDRSGAY+ R  AK++VASG  +RC VQ++Y IGV EPLSV V S G+  IPD+ + K V+E FD RP  IS  LDLKR     +  T+ YGHFGR+   FTWE+
Sbjct:  207 VKKEVIFHTLPESLVDKNTKIYINTTGRFVIGGPMGDCGLTGRKIIQDTYGGMGNHGGGAFSGKDPSKVDRSGAYMARYVAKNMVASGACKRCEVQIAYCIGVAEPLSVLVTSMGSSDIPDEALTKAVREVFDLRPYYISKRLDLKR---PIYKPTSCYGHFGREQAGFTWEV 376          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 92/188 (48.94%), Postives = 126/188 (67.02%), Query Frame = -3
Query:  253 IAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKLQA 816
            I ADL + V++P+IP   + + T + + P+GRFVIGGP  D GLTGRKI++DTY            GKDPTKVDRS +Y  R  AK+IVA+GLA RC V V+YAIGV +P+++ VD++GTG I ++ + K+V E+FD RP  I  +LDL+R     + + AAYGHFGR D +  WE +   K E+L+A
Sbjct:  208 IRADLIEKVVEPIIPVGLITNSTRYLINPTGRFVIGGPQADTGLTGRKIVVDTYGGMARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRCEVHVAYAIGVAKPVALRVDTFGTGLINEERLEKLVLEHFDLRPAAIIHHLDLRR---PIYRQVAAYGHFGRGDLNLPWERID--KAEELRA 390          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CYAP8 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 8801) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 95/183 (51.91%), Postives = 125/183 (68.31%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYL--DDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMI--SINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 819
            +I +DL + V++PV  D  +  +  T F + P+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQVSYAIGV  P+S+ V+++GTGK+ + ++LK+V+E F+ RP  I  ++NL +L     GRF +  AAYGHFGR D D  WE
Sbjct:  217 KIKSDLWEAVVQPVFGDIEIKPNQDTRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEVQVSYAIGVARPVSILVETFGTGKVDEDKLLKVVQELFELRPAGILQTLNLRELPSQRGGRFYQDVAAYGHFGRTDLDLPWE 399          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRS72.449e-4251.69S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STREM2.449e-4251.69S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STRE42.449e-4251.69S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_SHESH2.449e-4249.15S-adenosylmethionine synthetase OS=Shewanella sedi... [more]
METK_SALHS2.449e-4251.76S-adenosylmethionine synthetase OS=Salmonella heid... [more]
METK_PSE142.449e-4248.96S-adenosylmethionine synthetase OS=Pseudomonas syr... [more]
METK_PROM12.449e-4251.87S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_DESMR2.449e-4252.02S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_DESAP2.449e-4248.94S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_CYAP82.449e-4251.91S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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