DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CHLPD (S-adenosylmethionine synthetase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 IAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGK--IPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 816
            I  D+ ++VI  VIP   LD+KT  H+ P+GRFVIGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C VQVSYAIGV +P+S++++++GT K  + D EI +  +  FD RP  I     L +     + +TAAYGHFGR+  +F WE
Sbjct:  214 IKKDIIENVINVVIPAALLDEKTKLHINPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAAGLADKCTVQVSYAIGVAQPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIKRFGLNKPEGWCYQETAAYGHFGRE--NFPWE 389          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CHLL2 (S-adenosylmethionine synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 92/178 (51.69%), Postives = 116/178 (65.17%), Query Frame = -3
Query:  289 IAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGK--IPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 816
            I  D+ ++V+K VIP + LD+ T FH+ P+GRF IGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+ LA +C VQVSYAIGV  P+S+++D++GT K  + D EI    ++ FD RP  I    +L R     +  TAAYGHFGRD   F WE
Sbjct:  214 IRKDIIENVVKVVIPAELLDENTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAADLADKCTVQVSYAIGVARPVSIYIDTHGTAKHGLDDAEIQAKAEKIFDLRPAAIIRRFNLDRPHGWCYQDTAAYGHFGRD--IFPWE 389          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHESW (S-adenosylmethionine synthetase OS=Shewanella sp. (strain W3-18-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   + + +IKPV+P ++L   T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++++GTGK+ ++ ++K+V+++FD RP  ++  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  198 DLIEGVMESIIKPVLPAQWLSKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PROM3 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9303) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 97/201 (48.26%), Postives = 126/201 (62.69%), Query Frame = -3
Query:  241 DEIAADLKQHVIKPVIPDKYLD---DKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK---RGGNGRFLK-TAAYGHFGRDDPDFTWEIVKPLKWEKLQA*TNQ 822
            + I  DL  HV++P   D  L    + T F + P+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK +VA+GLA+R  VQ+SYAIGV +P+S+ V+S+GTGK+ + E+  +V+++FD RPG I     L+   +   GRF + TAAYGHFGR D +  WE V       LQA   Q
Sbjct:  212 ERITQDLWTHVVEPATADLPLKPNREATRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKCLVAAGLAQRAEVQLSYAIGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAIIEQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLNLPWEDVTDKASTLLQAEAQQ 412          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_METCA (S-adenosylmethionine synthetase OS=Methylococcus capsulatus GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 88/177 (49.72%), Postives = 120/177 (67.80%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            +I   + + +I  V+P ++L   T + + P+G FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY+ R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++++GTG+I ++ ++K+V+E+FD RP  +   LDL R     +  TAAYGHFGR +  FTWE
Sbjct:  199 DIREAVMEEIIYHVLPREWLHKDTKYFINPTGSFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYMGRYVAKNIVAAGLAERCEIQVSYAIGVAEPTSISIETFGTGRIAEETLVKLVREHFDLRPKGLITMLDLLR---PIYRPTAAYGHFGRTEGTFTWE 372          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_HAEPS (S-adenosylmethionine synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 86/170 (50.59%), Postives = 118/170 (69.41%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L   T + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP S+ V+++GTGK+ ++  +++V+E+FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPILPSEWLSQNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMVETFGTGKVSNEVFVRLVREHFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CHLP8 (S-adenosylmethionine synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 90/178 (50.56%), Postives = 118/178 (66.29%), Query Frame = -3
Query:  289 IAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGK--IPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 816
            I  D+ ++VI+ VIP + +D+ T FH+ P+GRF IGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C VQVSYAIGV  P+S++++++GTGK  + D +I +  +  FD RP  I    +L R     +  TAAYGHFGR+   F WE
Sbjct:  215 IKNDIIENVIRKVIPAELIDENTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCTVQVSYAIGVARPVSIYINTHGTGKHGLSDSQIQEKAEAIFDLRPLAIIRRFNLDRPHGWCYRDTAAYGHFGRE--QFPWE 390          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 92/184 (50.00%), Postives = 125/184 (67.93%), Query Frame = -3
Query:  253 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWEIVKPLKWEKLQA 798
            + +IKP+IP +     T FH+ P+G FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E+FD RP  I+  L+L +     + +TAAYGHFGR+  D  FTWE     K +K++A
Sbjct:  206 EEIIKPIIPAEMFHAATKFHINPTGMFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE-----KTDKVEA 381          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 92/184 (50.00%), Postives = 125/184 (67.93%), Query Frame = -3
Query:  253 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWEIVKPLKWEKLQA 798
            + +IKP+IP +     T FH+ P+G FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E+FD RP  I+  L+L +     + +TAAYGHFGR+  D  FTWE     K +K++A
Sbjct:  206 EEIIKPIIPAEMFHAATKFHINPTGMFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE-----KTDKVEA 381          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 92/184 (50.00%), Postives = 125/184 (67.93%), Query Frame = -3
Query:  253 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWEIVKPLKWEKLQA 798
            + +IKP+IP +     T FH+ P+G FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E+FD RP  I+  L+L +     + +TAAYGHFGR+  D  FTWE     K +K++A
Sbjct:  206 EEIIKPIIPAEMFHAATKFHINPTGMFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE-----KTDKVEA 381          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CHLPD2.449e-4251.12S-adenosylmethionine synthetase OS=Chlorobium phae... [more]
METK_CHLL22.449e-4251.69S-adenosylmethionine synthetase OS=Chlorobium limi... [more]
METK_SHESW3.199e-4249.15S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_PROM33.199e-4248.26S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_METCA3.199e-4249.72S-adenosylmethionine synthetase OS=Methylococcus c... [more]
METK_HAEPS3.199e-4250.59S-adenosylmethionine synthetase OS=Haemophilus par... [more]
METK_CHLP83.199e-4250.56S-adenosylmethionine synthetase OS=Chlorobaculum p... [more]
METK_ACIBT3.199e-4250.00S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS3.199e-4250.00S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC3.199e-4250.00S-adenosylmethionine synthetase OS=Acinetobacter b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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