DN617483

Overview
NameDN617483
Unique NameDN617483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PSESM (S-adenosylmethionine synthetase OS=Pseudomonas syringae pv. tomato GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 94/192 (48.96%), Postives = 121/192 (63.02%), Query Frame = -3
Query:  223 VIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW--EIVKPLKWEKLQA*TNQG*AAGL 792
            ++K VIP   L   T FH+ P+G F+IGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGK+ D +I+K+V++NFD RP  I+  LDL    +  +  TAAYGHFGR   + T   +      WEK         AAGL
Sbjct:  208 IVKHVIPAHLLHKDTQFHINPTGNFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKLSDDKIIKLVRDNFDLRPYAITTMLDLL---HPMYQATAAYGHFGRTPVEMTVGDDTFTAFTWEKTDRADALRAAAGL 396          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PROMT (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL2A) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 97/187 (51.87%), Postives = 123/187 (65.78%), Query Frame = -3
Query:  283 IAADLKQHVIKPV---IPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK-----RGGNGRFLK-TAAYGHFGRDDPDFTWEIV 816
            IA DL + V++P    +P K     T F + P+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA+ LA++  VQ+SYAIGV +P+S+ VDS+GTGK+ D E+ ++V++ FD RPG I    DL+     RG  GRF + TAAYGHFGR D    WE V
Sbjct:  214 IAKDLWKFVVEPATEDLPLKPAKGSTRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKALVAANLAKKVEVQLSYAIGVAKPISILVDSFGTGKVSDSELTQLVQDQFDLRPGAIIKAFDLQNLPSIRG--GRFYRDTAAYGHFGRTDILLPWEDV 398          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_PROMM (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9313) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 97/201 (48.26%), Postives = 125/201 (62.19%), Query Frame = -3
Query:  241 DEIAADLKQHVIKPVIPDKYLD---DKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK---RGGNGRFLK-TAAYGHFGRDDPDFTWEIVKPLKWEKLQA*TNQ 822
            + I  DL  HV++P   D  L    + T F + P+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK +VA+GLA+R  VQ+SYAIGV +P+S+ V+S+GTGK+ + E+  +V+++FD RPG I     L+   +   GRF + TAAYGHFGR D    WE V       LQA   Q
Sbjct:  212 ERITQDLWTHVVEPATADLPLKPNREATRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKCLVAAGLAQRAEVQLSYAIGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAIIEQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTDKASTLLQAEAQQ 412          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LEUCK (S-adenosylmethionine synthetase OS=Leuconostoc citreum (strain KM20) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 86/178 (48.31%), Postives = 122/178 (68.54%), Query Frame = -3
Query:  289 DEIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 822
            +++  D+++ VI  V+P + +DDKTI+++ PSGRFV+GGP  D+GLTGRKII+DTY            GKD TKVDRS AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ +D++GT KI + +I  I  E FDFRP  I   L+L+R     + +TAA+GHFGR D D  WE
Sbjct:  199 EQLRKDVRELVIDQVLPQELVDDKTIYYINPSGRFVLGGPQADSGLTGRKIIVDTYGGAAHHGGGAFSGKDATKVDRSAAYFARYVAKNLVAAGVADKLELQIAYAIGVAQPVSLNIDTFGTAKIDEAKIRDITAELFDFRPLAIINQLNLRR---PIYKQTAAFGHFGRTDIDLPWE 373          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LEGPC (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Corby) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 86/177 (48.59%), Postives = 121/177 (68.36%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   +++ +IK V+P ++L+DKT + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++  +FD  P  I    DL R     + +TA YGH+GR+  +F WE
Sbjct:  199 DLVEAIREEIIKSVLPAEWLNDKTRYFINPTGRFVIGGPLGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGRE--NFPWE 370          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 86/177 (48.59%), Postives = 121/177 (68.36%), Query Frame = -3
Query:  289 EIAADLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 819
            ++   +++ +IK V+P ++L+DKT + + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++  +FD  P  I    DL R     + +TA YGH+GR+  +F WE
Sbjct:  199 DLVEAIREEIIKSVLPAEWLNDKTRYFINPTGRFVIGGPLGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGRE--NFPWE 370          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_CITK8 (S-adenosylmethionine synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L+  T F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPILPSEWLNASTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_BRAJA (S-adenosylmethionine synthetase OS=Bradyrhizobium japonicum GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 87/185 (47.03%), Postives = 124/185 (67.03%), Query Frame = -3
Query:  271 DLKQHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGR---DDPDFTWE---IVKPLK 807
            D+ +  ++  +P  ++  KTI+H+ P+G+F IGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA RC +Q++YAIGV  PLS+++D++GTGK+P++++ K   +  D  P  I  +LDL R     + +T+AYGHFGR   ++  F+WE   +V+ LK
Sbjct:  214 DIVEPYVREALPKDWITPKTIWHINPTGKFYIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKVPEEQLEKAAAQAMDLTPRGIRSHLDLNR---PIYARTSAYGHFGRTPDNEGGFSWEKTDLVEQLK 395          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHIBS (S-adenosylmethionine synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=metK PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.127e-42
Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L   T F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPILPAEWLTSATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of DN617483 vs. ExPASy Swiss-Prot
Match: METK_SHIB3 (S-adenosylmethionine synthetase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metK PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.127e-42
Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = -3
Query:  289 QHVIKPVIPDKYLDDKTIFHLTPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 798
            + +IKP++P ++L   T F + P+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPILPAEWLTSATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
The following BLAST results are available for this feature:
BLAST of DN617483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSESM5.457e-4248.96S-adenosylmethionine synthetase OS=Pseudomonas syr... [more]
METK_PROMT5.457e-4251.87S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROMM5.457e-4248.26S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LEUCK5.457e-4248.31S-adenosylmethionine synthetase OS=Leuconostoc cit... [more]
METK_LEGPC5.457e-4248.59S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPA5.457e-4248.59S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_CITK85.457e-4251.76S-adenosylmethionine synthetase OS=Citrobacter kos... [more]
METK_BRAJA5.457e-4247.03S-adenosylmethionine synthetase OS=Bradyrhizobium ... [more]
METK_SHIBS7.127e-4251.76S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHIB37.127e-4251.76S-adenosylmethionine synthetase OS=Shigella boydii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617483 ID=DN617483; Name=DN617483; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTCAACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAA
ATTTCAGAACAATTCATATTCGCCTCTCAATTCATTATGCCTTGGATTGA
GAATCCATTAAACATATTTATTAAAAAAAAAAAAGGAAAAGAAAAAGAAA
GAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAAAAAGAAAAGT
AGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTT
TAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCTCCCAAGTGAA
ATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACC
TGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGC
CTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGAT
CTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACAC
CAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCGCTTGCC
ACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAAC
CTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGTGCCCCCCAGC
CACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCCAGCATCACCG
TGAGGGCCACCAATCACAAAACGGCCAGATGGGGTAAGATGGAAAATAGT
TTTGTCATCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCT
TGAGATCTGCAGCAATCTCATCAT
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