DN617482

Overview
NameDN617482
Unique NameDN617482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length527
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_TREPA (S-adenosylmethionine synthetase OS=Treponema pallidum GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.971e-33
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHG 495
            METF FTSESV+EGHPDKLCDQ+SDAVLDACL+QDP S VACET   T+++++ GEI+T+A+++  +I RD    IG+ SADVGLDA    VL     QSPDIAQGVHG
Sbjct:    1 METF-FTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHG 108          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_PROM1 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL1A) GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.971e-33
Identity = 70/123 (56.91%), Postives = 92/123 (74.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA-DVGLDADHCKVLVNIEQQSPDIAQGVH---GHLTKRPEEIG 525
            M  ++FTSESV EGHPDK+CDQVSDAVLDACL++DP S+VACE    T + ++ GEIT+KA VD+ K+VR+  +SIG+ SA D G DA+ C VLV ++QQS DIAQGV+    H T   +++G
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDACLSEDPTSRVACEAVVNTGLCLITGEITSKAEVDFNKLVREVIKSIGYRSASDGGFDANSCAVLVALDQQSSDIAQGVNEAEDHSTDPLDQVG 123          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.574e-33
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 1
Query:  181 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 510
            LFTSESV EGHPDK+CDQ+SDA+LDA L +DP+++VACET   T +V+V GEITT   VD  KIVRDT R IG+T A  G DAD C VL +I++QSPDIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAR 116          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_PROMT (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL2A) GN=metK PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.390e-33
Identity = 69/123 (56.10%), Postives = 92/123 (74.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA-DVGLDADHCKVLVNIEQQSPDIAQGVH---GHLTKRPEEIG 525
            M  ++FTSESV EGHPDK+CDQVSDAVLDACL++DP S+VACE    T + ++ GEIT+KA VD+ K+VR+  ++IG+ SA D G DA+ C VLV ++QQS DIAQGV+    H T   +++G
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDACLSEDPTSRVACEAVVNTGLCLITGEITSKAEVDFNKLVREVIKNIGYRSASDGGFDANSCAVLVALDQQSSDIAQGVNEAEDHSTDPLDQVG 123          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.390e-33
Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 1
Query:  172 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 519
            E  LFTSESV+EGHPDK+ DQ+SDA+LD  L +DPDS+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+T    G DAD+C V+  I++QSPDIAQGV   L  R  E
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGE 118          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.390e-33
Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 1
Query:  172 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEE 519
            E  LFTSESV+EGHPDK+ DQ+SDA+LD  L +DPDS+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+T    G DAD+C V+  I++QSPDIAQGV   L  R  E
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGE 118          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.734e-33
Identity = 73/119 (61.34%), Postives = 87/119 (73.11%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MVMV GE+TT A VD E++ R+T R IG+T +D+G DAD C VL  I +QSPDI QGV      RPE+ G
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQG 116          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.734e-33
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1
Query:  181 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 510
            LFTSESV EGHPDK+CDQ+SDA+LDA L +DP+++VACET   T +V+V GEITT   VD  +IVRDT R IG+T A  G DAD C VL +I++QSPDIA GV   L  R
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAR 116          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 9.780e-33
Identity = 66/107 (61.68%), Postives = 83/107 (77.57%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 489
            M+ F+FTSESV+EGHPDK+ DQVSDA+LDA L QDP S+VACET   T M ++ GEITT A +DY KIVR+T R IG+  + +G D + C VL +I++QSPDIAQGV
Sbjct:    3 MKDFIFTSESVSEGHPDKVADQVSDAILDAILTQDPKSRVACETMVTTGMAVIAGEITTNAIIDYPKIVRETIREIGYNDSAMGFDWETCAVLTSIDKQSPDIAQGV 109          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_SHEB9 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS195) GN=metK PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.277e-32
Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 489
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA LAQDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN617482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_TREPA1.971e-3364.22S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_PROM11.971e-3356.91S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_GEOSW2.574e-3362.73S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_PROMT4.390e-3356.10S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LACRJ4.390e-3358.62S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD4.390e-3358.62S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_PSEA65.734e-3361.34S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_GEOKA5.734e-3361.82S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_GEOSM9.780e-3361.68S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]
METK_SHEB91.277e-3265.42S-adenosylmethionine synthetase OS=Shewanella balt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617482 ID=DN617482; Name=DN617482; organism=Citrus sinensis; type=EST; length=527bp
CGTTTTACCTCCTCTCTCTCTTCTCTCAGCGTATGCATATCGTCTTTCTC
TCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACCTTCAATTCCA
TTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGT
TAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACATCAGAATCAGT
GAACGAGGGTCACCCGGACAAGCTGTGTGACCAAGTTTCGGACGCAGTAC
TGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTGCTTGTGAAACA
TGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATTACAACCAAGGC
CAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAGATCGATTGGGT
TCACATCGGCCGATGTGGGGCTTGATGCTGATCACTGCAAAGTTCTTGTT
AATATTGAGCAGCAGAGCCCTGACATTGCTCAGGGTGTTCATGGGCATCT
CACAAAGCGGCCTGAGGAGATTGGTGC
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