DN617482

Overview
NameDN617482
Unique NameDN617482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length527
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.502e-60
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QD DSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDQDSKVACETCTKTNMVMVFGEITTKAAVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.502e-60
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA++DYE+IVR TCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLIQDPDSKVACETCTKTNMVMVFGEITTKADIDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.502e-60
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            M+TFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA V+YEKIVRDTCR IGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 7.186e-60
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ++TFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETC+KTNMVM+FGEITTKANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIG
Sbjct:    4 VDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 122
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 9.386e-60
Identity = 108/119 (90.76%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYEKIVR+TCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEEIG
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 9.386e-60
Identity = 109/119 (91.60%), Postives = 112/119 (94.12%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK  +DYEKIVRDTCR+IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGKIDYEKIVRDTCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.226e-59
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYE+IVR TCR IGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEE+G
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.226e-59
Identity = 108/119 (90.76%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            M+TFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHL+K+PEEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCSKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLSKKPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.601e-59
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTK+PEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKQPEEIG 119
[Close]
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 1.601e-59
Identity = 110/119 (92.44%), Postives = 112/119 (94.12%), Query Frame = 1 
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TK PEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIG 119
The following BLAST results are available for this feature:
BLAST of DN617482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CAMSI5.502e-6093.28S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_PICSI5.502e-6091.60S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK1_VITVI5.502e-6091.60S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_DENCR7.186e-6089.92S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK2_BRAJU9.386e-6090.76S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_POPTR9.386e-6091.60S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK4_ARATH1.226e-5989.92S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_VITVI1.226e-5990.76S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK3_PETHY1.601e-5991.60S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK1_ARATH1.601e-5992.44S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617482 ID=DN617482; Name=DN617482; organism=Citrus sinensis; type=EST; length=527bp
CGTTTTACCTCCTCTCTCTCTTCTCTCAGCGTATGCATATCGTCTTTCTC
TCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACCTTCAATTCCA
TTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGT
TAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACATCAGAATCAGT
GAACGAGGGTCACCCGGACAAGCTGTGTGACCAAGTTTCGGACGCAGTAC
TGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTGCTTGTGAAACA
TGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATTACAACCAAGGC
CAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAGATCGATTGGGT
TCACATCGGCCGATGTGGGGCTTGATGCTGATCACTGCAAAGTTCTTGTT
AATATTGAGCAGCAGAGCCCTGACATTGCTCAGGGTGTTCATGGGCATCT
CACAAAGCGGCCTGAGGAGATTGGTGC
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