DN617482

Overview
NameDN617482
Unique NameDN617482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length527
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.091e-59
Identity = 108/119 (90.76%), Postives = 115/119 (96.64%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVR TCR IGF SADVGLDAD+CKVLV IEQQSPDIAQGVHGHLT+RPEEIG
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIG 123          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.731e-59
Identity = 110/118 (93.22%), Postives = 112/118 (94.92%), Query Frame = 1
Query:  172 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQD DSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPE+IG
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIG 121          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.658e-59
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.658e-59
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.658e-59
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.658e-59
Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ++TFLFTSESVNEGHPDK+CDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTK NVDYEKIVR TCR IGF SADVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    5 IDTFLFTSESVNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 123          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 6.084e-59
Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            M+TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQD +SKVACETCTKTN+VMVFGEITTKANVDYEKI RDTCR+IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 6.084e-59
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVR TCR IGF SADVGLDAD+CKVLV IEQQSPDIAQGVHGHL++RPEEIG
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIG 123          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.312e-58
Identity = 107/119 (89.92%), Postives = 111/119 (93.28%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITT A VDYEKIVR TCR IGF SADVGLDAD C VLVNIEQQSPDIAQGVHGHLTK+PE+IG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTSAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIG 119          
BLAST of DN617482 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.312e-58
Identity = 106/119 (89.08%), Postives = 115/119 (96.64%), Query Frame = 1
Query:  169 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 525
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKA+VDYEKIVR TCR IGF SADVGLDAD+CKVLV IEQQSPDIAQGVHGHL++RPEEIG
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIG 123          
The following BLAST results are available for this feature:
BLAST of DN617482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_ATRNU2.091e-5990.76S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK1_TRIMO2.731e-5993.22S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_SOLBR4.658e-5991.60S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK1_SOLTU4.658e-5991.60S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK1_SOLLC4.658e-5991.60S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK1_BETVU4.658e-5989.92S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_MESCR6.084e-5990.76S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK1_ATRNU6.084e-5989.92S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK4_BRAJU2.312e-5889.92S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK2_ATRNU2.312e-5889.08S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617482 ID=DN617482; Name=DN617482; organism=Citrus sinensis; type=EST; length=527bp
CGTTTTACCTCCTCTCTCTCTTCTCTCAGCGTATGCATATCGTCTTTCTC
TCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACCTTCAATTCCA
TTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGT
TAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACATCAGAATCAGT
GAACGAGGGTCACCCGGACAAGCTGTGTGACCAAGTTTCGGACGCAGTAC
TGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTGCTTGTGAAACA
TGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATTACAACCAAGGC
CAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAGATCGATTGGGT
TCACATCGGCCGATGTGGGGCTTGATGCTGATCACTGCAAAGTTCTTGTT
AATATTGAGCAGCAGAGCCCTGACATTGCTCAGGGTGTTCATGGGCATCT
CACAAAGCGGCCTGAGGAGATTGGTGC
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