DN617477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_CHICK (Cyclin-L1 OS=Gallus gallus GN=CCNL1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38 Identity = 85/185 (45.95%), Postives = 118/185 (63.78%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLR 602 + ++N L + L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q +WN NDSLR Sbjct: 56 VLITLENCLLPEHTLRFTPSMSSGLDPDTETELRVTGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPL-ILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLR 239
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL2_XENTR (Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.641e-38 Identity = 85/185 (45.95%), Postives = 118/185 (63.78%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLR 602 + +++N + +E+ +PS DGID TE LR GC+L+Q +GILL+LPQ MATGQVLF RF+ +SF + ++ VA + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q +WN NDSLR Sbjct: 23 VMISLENCLMAEERCALTPSVVDGIDVNTEIDLRCVGCELVQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVAMACVHLASKIEEAPRRIRDVINVFHRLRQLREKQKSTPL-ILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNKHLVQTSWNYMNDSLR 206
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_PONAB (Cyclin-L1 OS=Pongo abelii GN=CCNL1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 66 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRM 374 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + Sbjct: 54 IDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 156
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.314e-21 Identity = 61/182 (33.52%), Postives = 106/182 (58.24%), Query Frame = 3 Query: 72 NFYLTDEQLKD-SPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRRE---GLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE-LRQEAWNLANDSLR 602 ++Y + +++++ SPSR+DGID E+ LR C +Q+ G+ LK+PQ +AT V HRFY ++S A+ D + +A ++LA K+EE+PR + VI+V + + +++ G I+ +++ ++ K + ER +L +GF +V HP+K + + + L Q AWN ND LR Sbjct: 35 SWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQ----KELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDGLR 212
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20 Identity = 66/182 (36.26%), Postives = 103/182 (56.59%), Query Frame = 3 Query: 72 NFYLTDEQL-KDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRRE---GLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLE-TPLELRQEAWNLANDSLR 602 ++Y T E+L K SPSRKDGI E E+ +R C I++ GI LKLPQ +AT + HRFY +S A+ + +A ++LASK+E++P QVI V + RR+ I D+F K+ K + ER +L + F +++HP++ + + + L + E++Q AWN ND L+ Sbjct: 17 SWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFEKQ----KALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWLK 194
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20 Identity = 56/179 (31.28%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 72 NFYLTDEQLKD-SPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE-LRQEAWNLANDSLR 602 ++Y + +++++ S SR+DGID E+ LR C +Q+ G+ LK+PQ +AT V HRF+ ++S A+ D + +A ++LA K+EE+PR + VI++ + + +++ ++ + + + + K + ER +L +GF +V HP+K + + + L Q AWN ND LR Sbjct: 36 SWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQ-KEVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR 213
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT1_PANTR (Cyclin-T1 OS=Pan troglodytes GN=CCNT1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y T EQL++SPSR+ G+D E + R +L+Q+ G L + Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +E LP D S+ + + ++ E IL+ +GF ++HPH + + +L Q ++ +A +SL Sbjct: 11 WYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSL 181
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT1_HUMAN (Cyclin-T1 OS=Homo sapiens GN=CCNT1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y T EQL++SPSR+ G+D E + R +L+Q+ G L + Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +E LP D S+ + + ++ E IL+ +GF ++HPH + + +L Q ++ +A +SL Sbjct: 12 WYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSL 182
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT1_HORSE (Cyclin-T1 OS=Equus caballus GN=CCNT1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y T EQL++SPSR+ G+D E + R +L+Q+ G L + Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +E LP D S+ + + ++ E IL+ +GF ++HPH + + +L Q ++ +A +SL Sbjct: 12 WYFTREQLENSPSRRFGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSL 182
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20 Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 99 KDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEM-SRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE-LRQEAWNLANDSLR 602 ++SPSR D ID ET LR C +Q+ G+ LK+PQ +AT + HRF+ ++S AR D + +A ++LA K+EE+PR + VI+V + + +++ P + K+ E + E+ E+ +L +GF +V HP+K + + + L Q AWN ND LR Sbjct: 42 ENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKD--PTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR 209 The following BLAST results are available for this feature:
BLAST of DN617477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617477 ID=DN617477; Name=DN617477; organism=Citrus sinensis; type=EST; length=602bpback to top |