DN617477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20 Identity = 63/183 (34.43%), Postives = 107/183 (58.47%), Query Frame = 3 Query: 63 AIDNFYLT-DEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRT-ERHILKEMGFVCHVEHPHKFISNYLATLET-PLELRQEAWNLANDSLR 602 A ++Y+T DE + SPSR+DG+ A E LR C I++ G+ L+LPQ +AT +L HRFY ++S A+ + + VA V+LASK+E++P ++VIIV + R++ ++ K+ E + E+ E +L + F +++HP++ + L L +E++Q A NL ND++R Sbjct: 5 AAGSWYVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHR--IYQKEVLEKQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLINDAIR 185
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 7.445e-20 Identity = 60/182 (32.97%), Postives = 101/182 (55.49%), Query Frame = 3 Query: 66 IDNFYLTDEQLKD-SPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEM-SRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE-LRQEAWNLANDSLR 602 + +Y +++++ SPSR DGID ET LR C +Q+ G+ LK+PQ +AT + HRF+ ++S A+ D + +A ++LA K+EE+PR + VI V + + +++ P + K+ E + E+ E+ +L +GF +V HP+K + + + L Q AWN ND LR Sbjct: 30 VSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD--PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR 209
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT1_BOVIN (Cyclin-T1 OS=Bos taurus GN=CCNT1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.445e-20 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y T EQL++SPSR+ G+D E + R +L+Q+ G L + Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +E LP D S+ + + ++ E IL+ +GF ++HPH + + +L Q ++ +A +SL Sbjct: 12 WYFTREQLENSPSRRFGLDPDKELSNRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSL 182
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT1_MOUSE (Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y T EQL++SPSR+ G+D E + R +L+Q+ G L + Q + T V HRFY +SF +F +A ++++LA+K+EE P+K VI V H +E LP D S+ + + ++ E IL+ +GF ++HPH + + +L Q ++ +A +SL Sbjct: 12 WYFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDVGQRLNVSQLTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSL 182
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT2_HUMAN (Cyclin-T2 OS=Homo sapiens GN=CCNT2 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19 Identity = 57/179 (31.84%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 63 AIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 A ++ T EQL+++PSR+ G++ E + R +LIQE G L + Q + T V HRFY SF +F+ I+++++++LA+K+EE RK VI V H C P+ LD + + E+ E +L+ +GF +EHPH + + +L Q ++ +A +SL Sbjct: 7 ASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAH--ACLHPLEPL--LDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSL 181
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18 Identity = 64/181 (35.36%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 72 NFYLTDEQL-KDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYL---ATLETPLELRQEAWNLANDSLR 602 N+Y T E + K SPSR DGI+ ET R +QE G L PQ +AT VL RF+ ++S + D K VA +++A K+E SPR A V+ V +R+ +E L F LKM + E+ +L + +EHP+K + +++ E L Q A+N NDSLR Sbjct: 6 NWYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL--------RDVFERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLR 178
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CG1C_SCHPO (Cyclin pch1 OS=Schizosaccharomyces pombe GN=pch1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.552e-17 Identity = 54/175 (30.86%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 81 LTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLAT-LETPLELRQEAWNLANDSLR 602 ++ +QL +PS DGI E R GC+ I G+ LKLPQ +AT + FHRFY + S + VAA+ ++LA+K+E+S RK R ++I ++ + + + D +K++ + + TE +L+ + F VEHP+ ++ +++ + + + AW NDS R Sbjct: 20 ISKDQLVFTPSALDGIPLDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQKNSNVLV---DEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVADDKNVTKVAWTYINDSTR 191
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.458e-17 Identity = 57/180 (31.67%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHK----FISNYLATLETPLELRQEAWNLANDSLR 602 F+ +E ++SPSR+DGID TET LR C ++ G LK+PQ +AT HRF+ ++S A+ D + +A + LA K+EE+P VII + +++ + +++ ++ K + E +L + F + HP+K I Y+ + +L Q AWN ND LR Sbjct: 32 FFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQRKEVYDQQ----KELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVE-DAKTQLAQFAWNFVNDCLR 206
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNT_DROME (Cyclin-T OS=Drosophila melanogaster GN=CycT PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSL 599 +Y +++QL +SPSR+ GI E R LIQE G L++ Q + T V HRFY SF F +A++S++LA+K+EE PRK VI + LP + ++EL E+ E +L+ +GF ++HPH + ++ +L Q ++ LA++SL Sbjct: 45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVI------RAANKCLP----PTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSL 209
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNK_HUMAN (Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16 Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP----LELRQEAWNLANDSL 599 +Y + L +PS+ +G+D ATE R G I + G L L +ATG + FHRFY SF +F + A ++LA K+EE+P+K + +I + + + F + + K E+ ER +L+ + F VEHP++F+ Y L+ +L Q AW NDSL Sbjct: 24 WYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDII---------KTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSL 193 The following BLAST results are available for this feature:
BLAST of DN617477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617477 ID=DN617477; Name=DN617477; organism=Citrus sinensis; type=EST; length=602bpback to top |