DN617477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNK_MOUSE (Cyclin-K OS=Mus musculus GN=Ccnk PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP----LELRQEAWNLANDSL 599 +Y + L +PS+ +G+D ATE R G I + G L L +A G + FHRFY SF +F + A ++LA K+EE+P+K + +I + + + F + + K E+ ER +L+ + F VEHP++F+ Y L+ +L Q AW NDSL Sbjct: 24 WYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLANGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDII---------KTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSL 193
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15 Identity = 54/177 (30.51%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 75 FYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKK-FSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLR 602 ++ +E + SPSRKDGID E+ LR C +Q G+ L + Q ++ V+ HRFY ++S A+ D + +A SS++LA K E+ P + V++ + E E P + + + + E K + E +L F +E P+K ++ L L +L AWN +D +R Sbjct: 35 YFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASY--EIIYEWDPSASIRIHQTECYHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDLATAAWNFVHDWIR 209
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: FA58A_DANRE (Cyclin-related protein FAM58A OS=Danio rerio GN=fam58a PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 53/167 (31.74%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 84 TDEQLKDSPSRKDGID-EATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWN 581 T ++ R+ D E ++T R+ C I E+G+ L + MAT VL+HRF+ S ++ +VA S++ LA K+EE + R +I V HR + P+E + KF EL+ + + E IL+++ F EHPHK++ +YL ++ + L + AW+ Sbjct: 7 TSAAANEARGRRSAEDVEYSKTHFRV--CRFITETGVKLGMRSVPMATACVLYHRFFQSASLQIYEPYLVAMSAIHLAGKVEEQHLRTRDIINVCHRY-FHPDSEPLE----LNGKFWELRDSIVQCELLILRQLNFQVTFEHPHKYLLHYLLSVRS--LLNRHAWS 164
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: FA58A_MOUSE (Cyclin-related protein FAM58A OS=Mus musculus GN=Fam58a PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.749e-13 Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 174 IQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLE----------TPLELRQEAWNLANDS 596 I E+G+ L + +AT ++H+F+C+ + +D+ +VA SS++LA K+EE + R +I V HR P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ TP+ + AW L DS Sbjct: 36 IMEAGVKLGMQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSIYLAGKVEEQHLRTRDIINVSHRY-FNPGSEPLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISV--TAWALLRDS 179
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: FA58A_HUMAN (Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13 Identity = 46/162 (28.40%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 135 ATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--------LRQEAWNLANDS 596 A E + I E+G+ L + +AT ++H+F+C+ + +D ++A SS++LA K+EE + R +I V +R G P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ L + AW L DS Sbjct: 21 APEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRY-FNPSGEPLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDS 177
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: FA58A_RAT (Cyclin-related protein FAM58A OS=Rattus norvegicus GN=Fam58a PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.151e-12 Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 174 IQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLE----------TPLELRQEAWNLANDS 596 I E+G+ L + +AT ++H+F+C+ + +D+ +VA SS++LA K+EE + R +I V HR P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ TP+ + AW L DS Sbjct: 36 IMEAGVKLGMQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRDIINVSHRY-FNPGSEPLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISV--TAWALLRDS 179
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: FA58A_XENLA (Cyclin-related protein FAM58A OS=Xenopus laevis GN=fam58a PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.964e-12 Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 174 IQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--------LRQEAWNLANDS 596 I E+G+ L + +AT ++H+FY + S +D +VA S+++LA K+EE + R +I V HR P+E KF EL+ + E +L+ + F +HPHK++ +YL +L+ + + AW L DS Sbjct: 30 IMEAGVKLGMHSVPIATACTIYHKFYKETSLENYDPHLVAMSAIYLAGKVEEQHLRTRDIINVCHRYN-NPGSEPLE----VDSKFWELRDNIVHCELLMLRMLNFRVSFQHPHKYLLHYLISLKNWMNRHSWERTPIATAAWALLRDS 173
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNC_DICDI (Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 99 KDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLR 602 + +P K + LR + C +IQ G LKL Q ++T V F RFY K SF + ++VA + ++L+SK+EE +A+ +C + I+H F+ L ++ E +L+E+ F + HP+K + YL + + W + NDS R Sbjct: 23 ESNPKDKQYLTPIELKKLRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEECITQAK---------KCAAKMKEIDH------SFNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASIEIIWGIVNDSYR 175 The following BLAST results are available for this feature:
BLAST of DN617477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617477 ID=DN617477; Name=DN617477; organism=Citrus sinensis; type=EST; length=602bpback to top |