DN617475

Overview
NameDN617475
Unique NameDN617475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+N+  IGH+D GK+T T  +   L               +   + SF     +DK   E+ERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  M+   NK D
Sbjct:    8 RTKPHVNVGTIGHIDHGKTTLTAAITRVL---------------STKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTREHILLARQVGVPAMVVFLNKCD 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+N+  IGH+D GK+T T  +   L               +   + SF     +DK   E+ERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  M+   NK D
Sbjct:    8 RTKPHVNVGTIGHIDHGKTTLTAAITRVL---------------STKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTREHILLARQVGVPAMVVFLNKCD 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: CYSN_SULNB (Sulfate adenylyltransferase subunit 1 OS=Sulfurovum sp. (strain NBC37-1) GN=cysN PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF-------KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 581
            + K  +  +  G VD GKST  G ++Y     D ++I   +  AAE   R +         A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S AD A+++ID+  G          QTR H+ +   LG++ +I   NKMD     +S+  +D+I
Sbjct:   20 ENKDMLRFLTCGSVDDGKSTLIGRMLY-----DSKMIFDDQLSAAEGESRKYGTTGEKLDMALLVDGLQSEREQGITIDVAYRFFATEKRKFIIADTPGHEQYTRNMVTGASTADVAIILIDARKGILT-------QTRRHSFIVNLLGIEHVIVAINKMDLV--DFSEEVFDKI 180          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: CYSN_SACD2 (Sulfate adenylyltransferase subunit 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysN PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 581
            ++K  +  +  G VD GKST  G L++    I +  +E    + ++      K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     YS+  ++ I
Sbjct:   20 EQKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRNDNSKHGTTGDKVDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDMAIILIDARHGVMT-------QTRRHSFIASLLGIKHLVIAINKMDLV--DYSQETFESI 180          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: CYSN_ECOSE (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain SE11) GN=cysN PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   69 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 590
            I  + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+
Sbjct:   20 IAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKD 186          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: CYSN_ECO24 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20
Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   69 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 590
            I  + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+
Sbjct:   20 IAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKD 186          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_TOXGO (Elongation factor Tu, apicoplast OS=Toxoplasma gondii GN=tufA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20
Identity = 60/157 (38.22%), Postives = 81/157 (51.59%), Query Frame = 3
Query:   69 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            I  K+K HINI  IGHVD GK+T T  + Y L               A+ N+   K    +D    E  RGITI  +  ++ET   +   ID PGH D+IKNMITG +Q D A+L++ +  G          QT+EH LLA  +G+  +I   NK+D
Sbjct:    5 IFKKQKPHINIGTIGHVDHGKTTLTAAITYVL---------------AKNNQAKLKTYKEIDCAPEEIARGITIKTSHIEYETAVRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSAVDGPMP-------QTKEHLLLAKQIGISNIIVFLNKID 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20
Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            ++K H+NI  IGHVD GK+T T  L   L  +     +++++               +D    ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L+     G          QT+EH LLA  +GV  M+   NK D
Sbjct:   77 RKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGADGPMP-------QTKEHILLAKQVGVPNMVVFLNKQD 208          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_RHOSR (Elongation factor Tu OS=Rhodococcus sp. (strain RHA1) GN=tuf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+NI  IGHVD GK+T T         I K + + +    EA+  ++        +DK   E+ RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDAYPDLNEASAFDE--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_RHOOB (Elongation factor Tu OS=Rhodococcus opacus (strain B4) GN=tuf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+NI  IGHVD GK+T T         I K + + +    EA+  ++        +DK   E+ RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDAYPDLNEASAFDE--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141          
The following BLAST results are available for this feature:
BLAST of DN617475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_DESPS5.444e-2037.66Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTU1_DESPS5.444e-2037.66Elongation factor Tu 1 OS=Desulfotalea psychrophil... [more]
CYSN_SULNB5.444e-2034.29Sulfate adenylyltransferase subunit 1 OS=Sulfurovu... [more]
CYSN_SACD25.444e-2034.12Sulfate adenylyltransferase subunit 1 OS=Saccharop... [more]
CYSN_ECOSE5.444e-2032.95Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO245.444e-2032.95Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
EFTU_TOXGO7.110e-2038.22Elongation factor Tu, apicoplast OS=Toxoplasma gon... [more]
EFTU_TOBAC7.110e-2035.71Elongation factor Tu, chloroplastic OS=Nicotiana t... [more]
EFTU_RHOSR7.110e-2038.46Elongation factor Tu OS=Rhodococcus sp. (strain RH... [more]
EFTU_RHOOB7.110e-2038.46Elongation factor Tu OS=Rhodococcus opacus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617475 ID=DN617475; Name=DN617475; organism=Citrus sinensis; type=EST; length=591bp
GTTTCTGCAAGTCGGCGAGAGAGAAACCTTTTAGCAAATTTCATATCAAG
GTTTTATACTAGATTTGCATAATGGGTAAGGAGAAGACTCACATCAACAT
TGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACT
TGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAG
AAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCT
CGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCT
TGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCC
GGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGA
CTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTA
TCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTT
GGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCC
CAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGG
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