DN617475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_SALRD (Elongation factor Tu OS=Salinibacter ruber (strain DSM 13855) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 +EK H+N+ IGHVD GK+T T I K + ER A +++F+ +D ERERGITI + ++ET + +D PGH D++KNM+TG +Q D A+L++ S G QTREH LLA +GV ++ NK D Sbjct: 8 REKPHVNVGTIGHVDHGKTTLTA-------AITKVLAERVGGAA----EQTFE---AIDNAPEERERGITIATSHVEYETENRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVGSDDGPMP-------QTREHILLARQVGVPYLVVFMNKTD 140
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS-FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGH+D GK+T T I K + +R+ E+NK + F +DK E+ RGITI IA +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D Sbjct: 8 RTKPHMNIGTIGHIDHGKTTLTA-------AITKVLHDRYP----ELNKATPFDK---IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKAD 141
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_PELUB (Elongation factor Tu OS=Pelagibacter ubique GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 590 + K H NI IGHVD GK+T T + L + +++ +DK E+ERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++++ G QTREH LL +G+ ++ NK+D K +E ++E Sbjct: 8 RNKPHCNIGTIGHVDHGKTTLTAAITITLAELGGGKAVAYDQ---------------IDKAPEEKERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLGRQVGIPAIVVYLNKVDQVDDKDMIELVEEEIRE 156
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGH+D GK+T T I K + +++ + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFDEIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPALVVALNKCD 141
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T I K + E+ A + + +D E+ERGITI+ + ++ET + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGITATDFAE--------IDNAPEEKERGITINTSHIEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYLVVFLNKTD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_FLAPJ (Elongation factor Tu OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 55/154 (35.71%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T I + +A +SF +D E+ERGITI+ + ++ET + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LL +G+ +M+ NK+D Sbjct: 8 RSKPHLNIGTIGHVDHGKTTLTA------------AITKVLSDAGYCQAKSFDQ---IDNAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGIPRMVVFMNKVD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 +EK H+NI IGHVD GK+T T + L +K A+ K +D E+ERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ ++ G QT+EH LLA +GV +M+ NK+D Sbjct: 8 REKPHVNIGTIGHVDHGKTTLTAAITDILS----------KKGLAQAKKYD-----EIDGAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTKEHILLAAQVGVPKMVVFLNKVD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 72 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 72 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CYTH3 (Elongation factor Tu OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+N+ IGHVD GK+T T + L DK + E KR F +D E+ERGITI+ + ++ T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV M+ NK+D Sbjct: 8 RSKPHVNVGTIGHVDHGKTTLTAAITKVLA--DKGLAE----------KRDFSQ---IDNAPEEKERGITINTSHVEYATATRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPAMVVFMNKVD 139 The following BLAST results are available for this feature:
BLAST of DN617475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617475 ID=DN617475; Name=DN617475; organism=Citrus sinensis; type=EST; length=591bpback to top |