DN617475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L K A KR F +D E+ERGITI+ A ++ T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV Q++ NK+D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAN----------KGLAA--KRDFSS---IDNAPEEKERGITINTAHVEYSTANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPQLVVFMNKVD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJB (Elongation factor Tu OS=Synechococcus sp. GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+N+ IGHVD GK+T T + L + + +R+++ +D E+ RGITI+ A +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITTTLAALGQATAKRYDE---------------IDAAPEEKARGITINTAHVEYQTANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 3 Query: 69 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 554 I ++K H+NI IGHVD GK+T T + L V + F +D E+ERGITI+ + +++T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV ++ NK+D K Sbjct: 5 IFRRDKPHLNIGTIGHVDHGKTTLTASITKVLAKKGLAVAKEFSS---------------IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK 144
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_STRPB (Elongation factor Tu OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=tuf PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 64/155 (41.29%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERER-GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERER GITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERAGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 143
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_SPHWW (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H NI IGHVD GK++ T + K AE +F +DK ERERGITI A ++ET + + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK+D Sbjct: 8 RTKPHCNIGTIGHVDHGKTSLTAAIT---------------KVLAETGGATFVDYANIDKAPEERERGITISTAHVEYETEQRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLARQVGVPALVVFMNKVD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPE (Elongation factor Tu OS=Mycoplasma penetrans GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGH+D GK+T T + L A + ++ KY + DK E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ ++ G QTREH LLA +GV +M+ NK D Sbjct: 8 RSKAHVNIGTIGHIDHGKTTLTAAICTYL--------------AKKGGAKAMKYDEI-DKAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTREHILLARQVGVPKMVVFLNKCD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA9 (Elongation factor Tu OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T I K + +++ EA+ ++ +D E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYPDLNEASAFDQ--------IDNAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSD 141
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_LACAC (Elongation factor Tu OS=Lactobacillus acidophilus GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 61/154 (39.61%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L EK A+ S +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETENRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCD 140
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 62/161 (38.51%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 72 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 MGKEK H+NI IGH+D GK+T T + K A + F +DK E+ERGITI + ++ET K + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV Q++ NK D Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KVANLKSGGKFISYDEIDKAPEEKERGITIATSHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPQLVVFLNKCD 139 The following BLAST results are available for this feature:
BLAST of DN617475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617475 ID=DN617475; Name=DN617475; organism=Citrus sinensis; type=EST; length=591bpback to top |