DN617475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_DEISP (Elongation factor Tu OS=Deinonema sp. GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+N+ IGHVD GK+T T + + D + EK A + +DK E+ RGITI+ A ++ T + + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITFTAAASDPTI----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPTRHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVD 140
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTH (Elongation factor Tu OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK++ T + LG K +E +DK ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITKVLGFQGKANYTSYEN---------------IDKAPEERERGITISTSHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKCD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD 139
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CHLRE (Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii GN=tufA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 554 ++K H+NI IGHVD GK+T T + L V +++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV ++ NK D K Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDE---------------IDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNVVVFLNKEDQVDDK 144
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 548 +++ H+N+ IGHVD GK+T T + L +R+E +DK ER RGITI+ A ++ T + + D PGH D++KNMITGT+ D +L++ +T G QTREH LLA +GV+ ++ NK DA + Sbjct: 43 RDRPHVNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAVS 177
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCU (Elongation factor Tu-1 OS=Streptomyces collinus GN=tuf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19 Identity = 59/156 (37.82%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539 + K H+NI IGH+D GK+T T I K + + F EA+ ++ +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDAFPDLNEASAFDQ--------IDKAPEERQRGITISIAHVEYQTETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKAD 141 The following BLAST results are available for this feature:
BLAST of DN617475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617475 ID=DN617475; Name=DN617475; organism=Citrus sinensis; type=EST; length=591bpback to top |