DN617475

Overview
NameDN617475
Unique NameDN617475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: CYSN_PHOLL (Sulfate adenylyltransferase subunit 1 OS=Photorhabdus luminescens subsp. laumondii GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19
Identity = 54/156 (34.62%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            +EK  +  +  G VD GKST  G L++    I +  +   + ++  +  +  K   A ++D L AERE+GITID+A   F T K    + D PGH  + +NM TG S  D ++L+ID+  G  E       QTR H+ ++  LG++ ++   NKMD
Sbjct:   28 QEKGLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSTLQNDSKRIGTQGEKLDLALLVDGLAAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLSILLIDARKGVQE-------QTRRHSFISTLLGIRHLVVAVNKMD 176          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: NODQ_RHIS3 (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain N33) GN=nodQ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            ++K+ +  +  G VD GKST  G L+     I +  +   E+++ +         +A ++D L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD A+++ID+  G          QTR H+++A  LG++ ++   NK+D
Sbjct:   23 EKKSLLRFLTCGSVDDGKSTLIGRLLSDTKQIFEDQLAALERDSRKHGTTGDDIDFALLVDGLEAEREQGITIDVAYRFFATPKRKFIVADTPGHEQYTRNMATGASTADLAIVLIDARQGVLR-------QTRRHSIIASLLGIRHIVLAVNKID 171          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_PORYE (Elongation factor Tu, chloroplastic OS=Porphyra yezoensis GN=tufA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            ++K H+NI  IGHVD GK+T T  +   L  +     ++F++               +D    E+ RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RKKPHVNIGTIGHVDHGKTTLTAAISATLSTLGSTAAKKFDE---------------IDAAPEEKARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPTLVVFLNKED 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_PORPU (Elongation factor Tu, chloroplastic OS=Porphyra purpurea GN=tufA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            ++K H+NI  IGHVD GK+T T  +   L  +     ++F++               +D    E+ RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RKKPHVNIGTIGHVDHGKTTLTAAISATLSTLGSTAAKKFDE---------------IDAAPEEKARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPTLVVFLNKED 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_PETMO (Elongation factor Tu OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKL---GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + KTH+N+  IGH+D GK+T T  +   L   GG D    +                  ++DK   E+ RGITI+++  +++T K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  ++   NK+D
Sbjct:    8 RAKTHMNVGTIGHIDHGKTTLTAAITKALSYKGGADFTPFD------------------MIDKAPEEKARGITINVSHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGVMP-------QTREHVLLARQVNVPALVVFINKVD 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMS (Elongation factor Tu OS=Mycoplasma mycoides subsp. mycoides SC GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 3
Query:   90 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            H+NI  IGHVD GK+T T  +                K  +E     FK    +D    ERERGITI+ A  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G          QTREH LL+  +GV +++   NK D
Sbjct:   12 HVNIGTIGHVDHGKTTLTAAIT---------------KVLSEQGNAEFKDYANIDNAPEERERGITINTAHVEYKTANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVPKIVVFLNKCD 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_MYCCT (Elongation factor Tu OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 3
Query:   90 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            H+NI  IGHVD GK+T T  +                K  +E     FK    +D    ERERGITI+ A  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G          QTREH LL+  +GV +++   NK D
Sbjct:   12 HVNIGTIGHVDHGKTTLTAAIT---------------KVLSEQGNAEFKDYANIDNAPEERERGITINTAHVEYKTANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVPKIVVFLNKCD 139          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_LACJO (Elongation factor Tu OS=Lactobacillus johnsonii GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 58/154 (37.66%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+NI  IGHVD GK+T T  +   L        E + +               +D    E+ERGITI+ A  ++ET   +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV+ ++   NK+D
Sbjct:    9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKVD 140          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            + K H+NI  IGHVD GK+T T  +   L               ++   +S K+  + D    ER RGITI+ A  ++ET K+Y   +D PGH D++KNMITG +Q D A+L+  +  G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAISATL---------------SQYTGKSKKFDEI-DSAPEERARGITINTAHVEYETDKWYYAHVDCPGHADYVKNMITGAAQMDGAILVCSAANGPMP-------QTREHILLAKQVGVPYIVVFLNKAD 138          
BLAST of DN617475 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   78 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 539
            ++K H+NI  IGHVD GK+T T  +   L   +    ++F++               +D    E+ RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D
Sbjct:    8 RKKPHVNIGTIGHVDHGKTTLTAAISATLAAANDTKAKKFDE---------------IDAAPEEKARGITINTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNVVVFLNKQD 139          
The following BLAST results are available for this feature:
BLAST of DN617475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_PHOLL1.213e-1934.62Sulfate adenylyltransferase subunit 1 OS=Photorhab... [more]
NODQ_RHIS31.584e-1934.62Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
EFTU_PORYE1.584e-1935.06Elongation factor Tu, chloroplastic OS=Porphyra ye... [more]
EFTU_PORPU1.584e-1935.06Elongation factor Tu, chloroplastic OS=Porphyra pu... [more]
EFTU_PETMO1.584e-1936.31Elongation factor Tu OS=Petrotoga mobilis (strain ... [more]
EFTU_MYCMS1.584e-1937.33Elongation factor Tu OS=Mycoplasma mycoides subsp.... [more]
EFTU_MYCCT1.584e-1937.33Elongation factor Tu OS=Mycoplasma capricolum subs... [more]
EFTU_LACJO1.584e-1937.66Elongation factor Tu OS=Lactobacillus johnsonii GN... [more]
EFTU_GUITH1.584e-1937.66Elongation factor Tu, chloroplastic OS=Guillardia ... [more]
EFTU_GRATL1.584e-1935.06Elongation factor Tu, chloroplastic OS=Gracilaria ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617475 ID=DN617475; Name=DN617475; organism=Citrus sinensis; type=EST; length=591bp
GTTTCTGCAAGTCGGCGAGAGAGAAACCTTTTAGCAAATTTCATATCAAG
GTTTTATACTAGATTTGCATAATGGGTAAGGAGAAGACTCACATCAACAT
TGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACT
TGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAG
AAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCT
CGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCT
TGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCC
GGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGA
CTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTA
TCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTT
GGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCC
CAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGG
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