DN617471

Overview
NameDN617471
Unique NameDN617471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:36..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.776e-74
Identity = 127/222 (57.21%), Postives = 157/222 (70.72%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTF 792
            W   HATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY++ C+    P+WC PG ++ +TATNFCPPN  L +DNGGWCNPP  HFDMA+PA+ +I  YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV   G + S+ + GS  T W  M RNWG NW S SYL G  LSF+VT  DG+T+   ++VP+ W+FGQTF
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTF 273          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 5.169e-74
Identity = 129/220 (58.64%), Postives = 159/220 (72.27%), Query Frame = 1
Query:  142 QSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTF 792
            QS  ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY + C+ +  KWC PG  SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+  IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV VTNVGG+G V  +SIKGS TGW AMSRNWG NWQSN+YL G SLSF V   DGR VT+ +V P+NW FG T+
Sbjct:   29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATY 248          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.151e-73
Identity = 128/220 (58.18%), Postives = 154/220 (70.00%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTF 792
            W    ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY + C+     WC PG SI +TATN CPPN A  +D GGWCNPP +HFDM++PA+  IA Y+AGIVP++F+R+PC K GGIRFT++G  YF LV V NVGG+G V  VSIKGSKT W AMSRNWGQNWQSN+YLN  SLSF+V   D R VT  ++ P+NW FG T+
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTY 242          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 4.375e-73
Identity = 126/233 (54.08%), Postives = 162/233 (69.53%), Query Frame = 1
Query:  103 CFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTF 792
            C         GGW SG ATFY              YGNLY+QGYG   AALSTALFN G SCG CY + C+    P+WC  G+ + +TATN CPPN AL+ND+GGWCNPP  HFDM++PA+  I  YRAGIVP+ ++++ C ++GG+RFTV+G +YF LVL+TNV G+G V ++S+KGSKTGW  ++RNWG NWQ NS L G +LSF+VT++ G+T+  N VVP  W+FG TF
Sbjct:   15 CITSASAAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTF 247          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 9.747e-73
Identity = 122/222 (54.95%), Postives = 164/222 (73.87%), Query Frame = 1
Query:  136 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTF 792
            GW SG ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY++ C++  +P+WCL G ++ +T TN CPPN ALS+++GGWCNPP  HFDMAEPA+LQI  Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVL++NV G+G + SV +KG  T    +SRNWG NWQS++ L G +L+F VT++ G+T+   ++VPA W+FGQ+F
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSF 252          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.663e-72
Identity = 119/220 (54.09%), Postives = 153/220 (69.55%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C NDP+WCLPGS+ +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQNW +   L G  +SF+VT SDG T   N+V+P NW FGQTF+G
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 8.252e-72
Identity = 120/220 (54.55%), Postives = 155/220 (70.45%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VL+ NVGGAGD+  V +KG+KTGW  M +NWGQNW + + L G  LSF+VT SDG T    +V+P NW FGQTF+G
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 1.078e-71
Identity = 118/220 (53.64%), Postives = 153/220 (69.55%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C +DP+WCLPG+I +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQNW +   L G  +SF+VT SDG T   N+V+P NW FGQTF+G
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 5.349e-71
Identity = 118/220 (53.64%), Postives = 155/220 (70.45%), Query Frame = 1
Query:  139 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VL+ NVGGAGD+  V +K +KTGW  M +NWGQNW +++ L G  LSF+VT +DG T    +V+P NW FGQTF+G
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.556e-70
Identity = 123/227 (54.19%), Postives = 157/227 (69.16%), Query Frame = 1
Query:  121 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFE 795
            G+    W S  ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ +  +WC  G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVLVTNV G+G V +  +KGS T W +MSRNWG+NWQSN+YL G +LSF+V A DG  VT+  V PANWQFG T++
Sbjct:   21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTYQ 247          
The following BLAST results are available for this feature:
BLAST of DN617471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
EXP22_ORYSJ1.776e-7457.21Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA3_ORYSJ5.169e-7458.64Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP33_ORYSJ1.151e-7358.18Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP28_ORYSJ4.375e-7354.08Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ9.747e-7354.95Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ARATH1.663e-7254.09Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP22_ARATH8.252e-7254.55Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP25_ARATH1.078e-7153.64Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP26_ARATH5.349e-7153.64Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXPA9_ORYSJ1.556e-7054.19Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617471 ID=DN617471; Name=DN617471; organism=Citrus sinensis; type=EST; length=803bp
CTTAACAAAAAAACACATAAACATAAGCAGCCAGCAGTAGCAGCCATGGC
CAATATTGCAGCATCATCTAGCGTTGCTCTCCTTTTGTTTGTGCTCAATT
TTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGGTGGCAAAGTGGC
CATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCACAATGGGTGGTGC
TTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGACTAACACTGCAG
CACTTAGTACCGCTCTATTCAACAATGGCCTAAGCTGTGGTTCATGCTAT
GAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCCCGGCTCCATCAT
TGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCCTGTCTAACGACA
ACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGACATGGCTGAGCCC
GCTTTCTTGCAAATTGCCCAATACCGCGCCGGCATCGTCCCAATTTCCTT
CAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGTTTACCGTCAATG
GACACTCATACTTCAACCTGGTTTTGGTCACAAATGTCGGAGGAGCAGGA
GATGTACATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCAAGCAAT
GTCAAGGAACTGGGGCCAAAATTGGCAGAGCAATTCTTATCTTAACGGCC
CAAGTCTTTCTTTCCAAGTGACAGCCAGTGACGGCAGGACTGTGACTAGC
AACCATGTTGTGCCTGCAAATTGGCAATTTGGGCAAACCTTTGAGGGTGG
TCA
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