DN617470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NG YFNLVL+TNV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L GQ+LSF+VT SD RT TS N PA W Sbjct: 170 GVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 5.133e-28 Identity = 57/82 (69.51%), Postives = 64/82 (78.05%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIRF ++GH YF LV VTNVGG+G V +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF V DGR VT+ NV P+NW Sbjct: 161 GIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIRFT+NG YFNLVLVTNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF+VT+SD R+ TS N+ PANW Sbjct: 163 GIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 51/82 (62.20%), Postives = 67/82 (81.71%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NG+SYF LVL+TNVGG G + SV IKG+KTGW MSRNWG NWQ+N+YLN Q++SF VT++ G+T+ +V P+NW Sbjct: 156 GVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.143e-27 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RF +NG YF LV + NVGGAG + SVSIKGSKTGW AMSRNWG NWQSN+YL+GQ+LSF +T +DG T NVVP++W Sbjct: 159 GVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSW 240
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.675e-27 Identity = 56/82 (68.29%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIRFT++G YF LV V NVGG+G V VSIKGSKT W AMSRNWGQNWQSN+YLN QSLSF+V D R VT N+ P+NW Sbjct: 155 GIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 5.312e-25 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIRF + GH Y+ LVLVTNV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+LSF+V A DG VT+ +V PANW Sbjct: 159 GIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.545e-24 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NG +YF LVL++NV G G++ V IKGSK+ W+ MSRNWG N+QSN+YLNGQSLSF+V SDG + NVVP+NW Sbjct: 161 GMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNW 243
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.018e-24 Identity = 49/82 (59.76%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFTV+G +YF LVL+TNV G+G V ++S+KGSKTGW ++RNWG NWQ NS L GQ+LSF+VT++ G+T+ N+VVP W Sbjct: 160 GVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 3.443e-24 Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK--TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFTV G YF LVLVTNV AG V S+ ++GS+ GW AMSRNWG NWQS +YL+GQ LSF+VTA+DG+T+ VVP +W Sbjct: 167 GVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSW 250 The following BLAST results are available for this feature:
BLAST of DN617470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617470 ID=DN617470; Name=DN617470; organism=Citrus sinensis; type=EST; length=511bpback to top |