DN617470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 3.443e-24 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RF V G S+F VL++NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ LSF++T+SDG+T+T+ NVVP W Sbjct: 163 GVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.232e-23 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NGH YFNLVLVTNV G + S+ I GS T W M RNWG NW S SYL GQ+LSF+VT DG+T+ N+VP+ W Sbjct: 167 GVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGW 249
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23 Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NGH YFNLVLVTNV G + S+ I GS T W M RNWG NW S SYL GQ LSF+VT DG+T+ N+VP+ W Sbjct: 183 GVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 4.972e-23 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+ G +YF LVLVTN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF VT++ G+T+ ++VVPA W Sbjct: 154 GVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.493e-23 Identity = 46/82 (56.10%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NG +YF LVLVTN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF VT++ G+T+ ++ VPA W Sbjct: 154 GVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = -2 Query: 265 IRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 507 +RFTV+G F VL+TNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF+VT+SD TVTS NV P NW Sbjct: 172 MRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.889e-22 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIRFT+ G ++F LVLV+NV G+G V SVS+KG TGW ++RNWG NWQ NS L GQ+LSF VT++ G+T+ NVVP+ W Sbjct: 160 GIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22 Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NGH YFNLVLVTNV G + S+ + GS T W M RNWG NW S SYL GQ LSF+VT DG+T+ N+VP+ W Sbjct: 185 GVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.223e-22 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ LSF+VT +DG+T+ NVV W Sbjct: 167 GVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22 Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RF +NG +YF LVLVTN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF VT++ G+T+ ++ VPA W Sbjct: 145 GVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226 The following BLAST results are available for this feature:
BLAST of DN617470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617470 ID=DN617470; Name=DN617470; organism=Citrus sinensis; type=EST; length=511bpback to top |