DN617470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 9.376e-22 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+NGH YF LVLVTNV AG + S+ + GS T W M+RNWG W S +YL GQ LSF+VT +D +T+ NVVP W Sbjct: 172 GLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 9.376e-22 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F G+ YF +VL+ NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ LSF+VT SDG T NV+P NW Sbjct: 180 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF+VT SDG T NNV+P NW Sbjct: 183 GVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF+VT SDG T NNV+P NW Sbjct: 176 GVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.077e-21 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F G+ YF +VL+ NVGGAGD+ V +K +KTGW M +NWGQNW +++ L GQ LSF+VT +DG T NV+P NW Sbjct: 186 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.077e-21 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+ G FN+V+++NVGG G V SV+++GSK W M+RNWG NWQS+ L GQ LSF+VT +D +T T NVVP++W Sbjct: 156 GVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20 Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GIR+T+ G+ YFNLV+V+NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL+F+V D R TS +V+P +W Sbjct: 174 GIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.768e-20 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+ G + F VL+TNV G+V +V +KGS+TGW M RNWGQNWQ ++ L GQ LSF+VT GRTV + +V P +W Sbjct: 166 GMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.309e-20 Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFTV G +YF LVL+TNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF VT + G+ + +V PA W Sbjct: 161 GVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.309e-20 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFTV G +F LVLV NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF VT + G+ + +V PA W Sbjct: 160 GVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241 The following BLAST results are available for this feature:
BLAST of DN617470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617470 ID=DN617470; Name=DN617470; organism=Citrus sinensis; type=EST; length=511bpback to top |