DN617470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.776e-20 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTA-SDGRTVTSNNVVPANW 510 G+RF G+SY+ L+ V NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF+VT+ + G T+ + NV PANW Sbjct: 167 GMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.146e-19 Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RFT+ G +YF LVL++NV G+G + SV +KG T +SRNWG NWQS++ L GQ+L+F VT++ G+T+ N+VPA W Sbjct: 165 GVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 4.355e-19 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N L GQS+S +VT SDG T +V+PA+W Sbjct: 169 GVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.162e-18 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G+RF+++G S+F VL++NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF+VT G+T+ S +V P W Sbjct: 162 GLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.121e-17 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGR-TVTSNNVVPANW 510 GIRF G+ Y+ LV V NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF++T+ R T+ + N PA+W Sbjct: 162 GIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.642e-16 Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 GI++T+ G+ +N+V+V NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F+V D R TS V P +W Sbjct: 196 GIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.451e-16 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 510 G++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF++T SDG +V P +W Sbjct: 218 GVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of DN617470 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.196e-14 Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = -2 Query: 265 GIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTA-SDGRTVTSNNVVPANW 510 G+RF + G+ Y+ L V NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF+VT+ + G+T+ + V PA+W Sbjct: 170 GLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253 The following BLAST results are available for this feature:
BLAST of DN617470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617470 ID=DN617470; Name=DN617470; organism=Citrus sinensis; type=EST; length=511bpback to top |