DN617469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.100e-36 Identity = 75/158 (47.47%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 50 MGQGTPGGLNRQXXXXXXXXXXXXXXXXXFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 MGQG G +++ +EP ++ GRK+RK GP A +LP + P ++CKL+LL++ERIKD+LL+EEEFV+N E LKP E+K EE++ +++++RG+P+S+G LEE+ID++HAIV+S P+YYV ILSFVD++ LEPGC++L+ Sbjct: 1 MGQGVSSGQDKKKKKGSNQKPK-------YEPPVQ-SKFGRKKRKG-GPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLL 149
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.029e-34 Identity = 69/132 (52.27%), Postives = 100/132 (75.76%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKP---QEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 ++P PP + G+K +K++G E + +LP +TP SKCKL+ LKLERIKDYLLME+EF+ N + +P + K + D +++LRG P++VGNLEE+ID+NHAIVSS+VGPE+YV I+SFVD+ +L G +L+ Sbjct: 21 YQPPPPPTQFGKK-KKRRGAETSTKLPVITPHSKCKLKQLKLERIKDYLLMEQEFLQNYDLNQPKVDENSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLL 151
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24 Identity = 55/118 (46.61%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 170 RKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 R++R+ K +AA++ P V PL KCKLR LKL+++ L +E+ ++ E K E + + V+ LRGSP+SVG LEE +D++H I+++ VG EYYV I+SFVD+D LEPGC +L+ Sbjct: 20 RRRRRVKEGKAASKPPQVYPLMKCKLRYLKLKKLAHLLSLEDNILSLCEPDK-SSEGSNSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLL 136 The following BLAST results are available for this feature:
BLAST of DN617469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617469 ID=DN617469; Name=DN617469; organism=Citrus sinensis; type=EST; length=524bpback to top |