DN617468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 1.060e-23 Identity = 56/97 (57.73%), Postives = 68/97 (70.10%), Query Frame = -1 Query: 179 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEGLYM 469 PGRIDRKI F PD+ T+++I IHTS+M L++DVNLE V KD+ SGADI+A+CTEAGLLALRERRM+VT DF E EGLY+ Sbjct: 341 PGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 437
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.361e-23 Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = -1 Query: 182 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEGLY 469 PGRIDRKIEF +PD T+++IF IHTSRMTL + VN+E + K++ SGADIKAICTEAG++ALRERR VT DF ++ V GLY Sbjct: 328 PGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVFFSKQKMVSAGLY 423
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = -1 Query: 188 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEG 469 PGRIDRKI F PD T+R+IF IHTS+M L +DVNLEE + KD+ SGA+IKAI +EAGLLALRERRM+V DF EG P G Sbjct: 351 PGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAG 444
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.652e-18 Identity = 41/76 (53.95%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IFQ+ TS+M L+D+V+LE++V D+ SGA+I++IC EAG+ A+R+ R + DF Sbjct: 309 PGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF T++M L+++V+LEEFV D SGADI AIC EAG+ A+RE R V DF Sbjct: 321 PGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDF 396
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = -1 Query: 242 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 466 GR+DRKIEFP P + R RI QIH+ +M + DVN EE D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 336 GRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410 The following BLAST results are available for this feature:
BLAST of DN617468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617468 ID=DN617468; Name=DN617468; organism=Citrus sinensis; type=EST; length=469bpback to top |