DN617468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = -1 Query: 245 PGRIDRKIEFP-LPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTD 469 PGR+DRKIEFP D + RR +FQ T++M L+ +V+L+ F+M D SGA I AI +AGLLA+R+ R + +D Sbjct: 293 PGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSD 368
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE P P+ R RI +IH M +AD V+ + EFSGA + ++ TEAG+ A+R+ R +V DF Sbjct: 311 PGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDF 386
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIE PLP+ R + +IH + +T DV+ E D F+ AD++ +CTEAG+ A+R R V DF Sbjct: 296 PGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDF 371
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE +PD R I +IHT +M L + V+L E + GAD+KA+CTEAG+ A+RE R + DF Sbjct: 307 PGRFDRIIEISMPDEDGRLEILKIHTEKMNLKN-VDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDF 381
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = -1 Query: 245 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTD 469 PGR DR IE PLP+ + R+ IF+I+ +M ++ + + FSGA+IK +CTEAG +A+R R V TD Sbjct: 293 PGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTD 367
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE +PD R I +IHT +M L V+L E + GAD+KA+CTEAG+ A+RE R + DF Sbjct: 307 PGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDF 381
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = -1 Query: 245 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTD 469 PGR+DRK+E PLP+ R IF+IHT+++ + + E V D F+GADI+ TEAG A+R+ R + D Sbjct: 340 PGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = -1 Query: 245 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTD 469 PGR DR IE PLP ++ R I IHT + +A DV+LE + FSGAD+KA+ EAG A+R +T D Sbjct: 298 PGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDD 372 The following BLAST results are available for this feature:
BLAST of DN617468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617468 ID=DN617468; Name=DN617468; organism=Citrus sinensis; type=EST; length=469bpback to top |