DN617468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 1.255e-16 Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = -1 Query: 242 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 466 GR+DRKIEFP P + R RI QIH+ +M + DVN EE D+F+GA +KA+C EAG+LALR +V H DF Sbjct: 330 GRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 1.255e-16 Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P + R I +IH+ +M L +NL + + SGAD+K +CTEAG+ ALRERR+ VT DF Sbjct: 307 PGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDF 382
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.255e-16 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R +FQ+ T++M L D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 319 PGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 1.255e-16 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = -1 Query: 242 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 466 GR+DRKIEFPLP +R +I QIH+ +MT DD+N +E DEF+GA +KA+ EAG++ALR + V H DF Sbjct: 341 GRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDF 415
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.639e-16 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = -1 Query: 245 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTD 466 GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D Sbjct: 349 GRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHED 422
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.140e-16 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR I+ PLPD + R IF+IHT M LA+DV+L++ + SGADIKAICTEAG++A+RE R VT DF Sbjct: 338 PGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF 413
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.650e-16 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = -1 Query: 242 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 466 GR+DRKIEFPLP+ + R I QIH+ +M ++ DVN +E ++F+GA +KA+C EAG++ALR ++ H DF Sbjct: 328 GRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDF 402
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.767e-16 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE PLP+ RR I +IHTS M LA++V++E D SGAD+KAICTEAG+ A+R+ R +VT DF Sbjct: 310 PGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16 Identity = 43/76 (56.58%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE P PD K R I +IHT +M LA+DVNLEE + GA++KAICTEAG+ A+RE R VT DF Sbjct: 329 PGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF Sbjct: 324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399 The following BLAST results are available for this feature:
BLAST of DN617468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617468 ID=DN617468; Name=DN617468; organism=Citrus sinensis; type=EST; length=469bpback to top |