DN617468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEFPLPD + +R +F TS+M+L D V++E V ++ S ADI +IC EAG+LA+R R VT DF Sbjct: 293 PGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+ VT DF Sbjct: 321 PGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+ VT DF Sbjct: 321 PGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15 Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = -1 Query: 242 GRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 466 GR+DRK+EFPLP+ + R I +IH+ +M + DD+N EE DE++GA +K++C EAG++ALR+ K+ H F Sbjct: 345 GRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 302 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P + R I +IH+ M L ++L+ + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 305 PGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 304 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 379 The following BLAST results are available for this feature:
BLAST of DN617468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617468 ID=DN617468; Name=DN617468; organism=Citrus sinensis; type=EST; length=469bpback to top |