DN617468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.941e-14 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 272 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRE 469 PGR++R I P PD K R IF+IH LADDVN+EE + +SGADI+A+C EAG+LA+RE Sbjct: 612 PGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRE 677 HSP 2 Score: 69.3218 bits (168), Expect = 9.304e-12 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = -1 Query: 275 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALR 469 PGR DR+IE +PD + R+ I +IHT +M LA+DV+LEE + F GAD++A+C EA + ALR Sbjct: 338 PGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALR 402
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR I+ P+P + R +I +IH +M LADDV+L + + DE SGAD+ AI EAG+ A+R R V +DF Sbjct: 318 PGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDF 393
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13 Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE PLPD + R I ++HT RM L V+L + SGAD+KAI TEAG+ A+RERR VT DF Sbjct: 299 PGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373
BLAST of DN617468 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13 Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 242 PGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMPKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 469 PGR DR IE PLPD + R I ++HT RM L + V+L + SGAD+KAI TEAG+ A+RERR VT DF Sbjct: 299 PGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKN-VDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373 The following BLAST results are available for this feature:
BLAST of DN617468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617468 ID=DN617468; Name=DN617468; organism=Citrus sinensis; type=EST; length=469bpback to top |