DN617466

Overview
NameDN617466
Unique NameDN617466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617466 vs. ExPASy Swiss-Prot
Match: VPS34_CANAL (Phosphatidylinositol 3-kinase VPS34 OS=Candida albicans GN=VPS34 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = -3 
Query:  364 SSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 588
            +SNLILNLF LM  +NIPDI  DP + I K+QEKF L + +E  +  FQ+LIN+SV+A  P +++ +H  AQYWR
Sbjct:  945 NSNLILNLFQLMLDANIPDIQFDPSRVIEKVQEKFCLQMTEEEAILHFQNLINDSVNAFLPVVIDRLHSLAQYWR 1019
[Close]
BLAST of DN617466 vs. ExPASy Swiss-Prot
Match: VPS34_YEAST (Phosphatidylinositol 3-kinase VPS34 OS=Saccharomyces cerevisiae GN=VPS34 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.367e-15
Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = -3 
Query:  364 SSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 588
            ++ LILNLF LM  SNIPDI  DP   IL+++E+F L++ +E     FQ+LIN+SV+AL P +++ +H  AQYWR
Sbjct:  800 NAGLILNLFELMKTSNIPDIRIDPNGAILRVRERFNLNMSEEDATVHFQNLINDSVNALLPIVIDHLHNLAQYWR 874
The following BLAST results are available for this feature:
BLAST of DN617466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
VPS34_CANAL3.652e-1653.33Phosphatidylinositol 3-kinase VPS34 OS=Candida alb... [more]
VPS34_YEAST2.367e-1550.67Phosphatidylinositol 3-kinase VPS34 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617466 ID=DN617466; Name=DN617466; organism=Citrus sinensis; type=EST; length=590bp
TCTGGGCGATGCTGAGATAATTGTTATTAGCTAAAAGTTTATCGGAATAC
AGATCAAATGATACAGCCAAGAATTATTATATACAAACATTTTACAACAT
TGTTAATGTTCTGTTCTACCGAAGGTGTCTTCTATCCTTCATACTCACTG
TCAATCTGAAATGAGGAGAATACCGTCAATATGACATGAGGAGAAAGAAA
AAAACCAGAATGCATGCATTCATGTATGTCATGTAGAATAGAGCTGTTTC
CGGATGACAAGTGAAAATCCAAACAGAAACAGCACATCTAAAGAACAGAA
CCCAACATTATCAGGCTGTGCAAAAAAAGCTTAAACTAAACACCTAATTT
GGTTCTGAGATCAGCGCCAGTATTGAGCCCACCGATGTATGGTCTCAACC
ATTTGAGGGAACAAAGCGCTAACACTCTCATTGATAAGATCCTGGAAGAA
GTGTACACAGGCCTCATCGTCCAAGTCCAACCGAAACTTCTCTTGAAGCT
TAAGGATGCCTTTCTCAGGATCAGAAGCTATGTCAGGAATGTTTGAACCC
GCCATCAGATGAAACAGATTTAAAATAAGGTTACTAGATT
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