DN617460

Overview
NameDN617460
Unique NameDN617460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.038e-55
Identity = 107/173 (61.85%), Postives = 131/173 (75.72%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.355e-55
Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 1
Query:   64 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDP +KVACET  KT M+++ GEIT+KA VDY+K+VR+T + IG+     G D   C VL+ ++QQSP+IA GV  H  +  E+IGAGDQG MFGYATDET E MPL+ VLA KL  ++ E+R++    W RPD KTQVT EY
Sbjct:   28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEY 199          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 5.151e-55
Identity = 107/173 (61.85%), Postives = 130/173 (75.14%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.714e-54
Identity = 110/178 (61.80%), Postives = 128/178 (71.91%), Query Frame = 1
Query:   70 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-----PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP  +VACET   T MV+V GEITT   VD  KIVR+T  +IG+     G D+D C VL +I +QSPDIA GV      +      ED IGAGDQG MFGYA +ETSE+MP++  +A KL  RL+EVRKN T  +LRPDGKTQVTVEY
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY 181          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.826e-53
Identity = 104/181 (57.46%), Postives = 130/181 (71.82%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+V    G D D+C VLV++++QSPDIAQGV      R  D      IGAGDQG MFGYA +ET E MPL   L+ +L  ++  +RK+ T  WLRPD K QVTVEY
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEY 183          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.223e-53
Identity = 104/178 (58.43%), Postives = 125/178 (70.22%), Query Frame = 1
Query:   70 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            LFTSESV EGHPDK+CDQISDA+LDA L +DP ++VACETCT T +VMV GEI+T   VD  K+VR+T R IG+     G D D C V+  I++QS DIA GV      +       E +GAGDQG MFG+AT+ET  +MPL   +A KL  RLTEVRK+ T  +LRPDGKTQVTVEY
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEY 181          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.832e-52
Identity = 109/180 (60.56%), Postives = 127/180 (70.56%), Query Frame = 1
Query:   70 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITT   VD  KIVRDT R IG+     G DAD C VL +I++QSPDIA GV        G  T +  E IGAGDQG MFG+A +ET E MPL   LA +L  RL+EVRK +   +LRPDGKTQVTVEY
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEIEAIGAGDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVEY 186          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52
Identity = 105/180 (58.33%), Postives = 125/180 (69.44%), Query Frame = 1
Query:   70 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  +I RD  R IG+     G DAD C V+ +I++QSPDIA GV+     R         E IGAGDQG M G+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTECYVDIPRIARDVIRDIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVNKALEARRGELTDAEIEAIGAGDQGLMIGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEY 183          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.330e-52
Identity = 104/178 (58.43%), Postives = 126/178 (70.79%), Query Frame = 1
Query:   70 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTK------RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV            R + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDRLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY 181          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.961e-52
Identity = 107/176 (60.80%), Postives = 125/176 (71.02%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN T  WLRPD K+Q+T +Y
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQY 173          
The following BLAST results are available for this feature:
BLAST of DN617460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_CAEEL1.038e-5561.85Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_DROME1.355e-5560.92S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK5_CAEEL5.151e-5561.85Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_CLOTE9.714e-5461.80S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_LACPL2.826e-5357.46S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_CLOBB8.223e-5358.43S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_GEOSW1.832e-5260.56S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_THETN4.081e-5258.33S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_CLOBL5.330e-5258.43S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_PROMH6.961e-5260.80S-adenosylmethionine synthetase OS=Proteus mirabil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617460 ID=DN617460; Name=DN617460; organism=Citrus sinensis; type=EST; length=586bp
CTTAAGTCTCGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCT
TGATAAGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTC
ACCCCGACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGC
CTTGAGCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGAC
CAACATGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACT
ATGAGAAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGAT
GATGTGGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCA
ACAAAGCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCC
CTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACT
GATGAGACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACT
TGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAA
GGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACT
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