DN617460

Overview
NameDN617460
Unique NameDN617460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:191..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.352e-94
Identity = 161/175 (92.00%), Postives = 170/175 (97.14%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQGHMFGYATDET E MPL+HVLATKLG+RLTEVRKN TC+WLRPDGKTQVT+EY
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEY 177          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.352e-94
Identity = 164/176 (93.18%), Postives = 169/176 (96.02%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA+LTEVRKN TC WLRP+GKTQVT EY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPNGKTQVTGEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.602e-94
Identity = 162/175 (92.57%), Postives = 167/175 (95.43%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            +TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTK  +DYEKIVRDTCR IGF S+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY
Sbjct:    3 DTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEY 177          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.602e-94
Identity = 164/176 (93.18%), Postives = 170/176 (96.59%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRK+ TC WLRPDGKTQVTVEY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.602e-94
Identity = 164/176 (93.18%), Postives = 168/176 (95.45%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPESKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN  C+WLRPDGKTQVTVEY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.602e-94
Identity = 165/176 (93.75%), Postives = 170/176 (96.59%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.638e-93
Identity = 165/176 (93.75%), Postives = 169/176 (96.02%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.139e-93
Identity = 162/177 (91.53%), Postives = 170/177 (96.05%), Query Frame = 1
Query:   55 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            +++TFLFTSESVNEGHPDKLCDQISDAVLDACL +DPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVS+DVGLDA+HCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN  C+WLRPDGKTQVTVEY
Sbjct:    3 EVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEY 179          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.139e-93
Identity = 162/176 (92.05%), Postives = 169/176 (96.02%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            ME+FLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA +DYEKIVRDTCRSIGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPED+GAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEY 176          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.139e-93
Identity = 163/176 (92.61%), Postives = 167/176 (94.89%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVR TCRSIGFVSDDVGLDAD C VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEY 176          
The following BLAST results are available for this feature:
BLAST of DN617460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MEDTR7.352e-9492.00S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK3_BRAJU7.352e-9493.18S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK_MUSAC9.602e-9492.57S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_ELAUM9.602e-9493.18S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_BETVU9.602e-9493.18S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK1_SOLLC9.602e-9493.75S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK1_SOLTU1.638e-9393.75S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK3_ORYSJ2.139e-9391.53S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK2_SUASA2.139e-9392.05S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_POPTR2.139e-9392.61S-adenosylmethionine synthetase 2 OS=Populus trich... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617460 ID=DN617460; Name=DN617460; organism=Citrus sinensis; type=EST; length=586bp
CTTAAGTCTCGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCT
TGATAAGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTC
ACCCCGACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGC
CTTGAGCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGAC
CAACATGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACT
ATGAGAAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGAT
GATGTGGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCA
ACAAAGCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCC
CTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACT
GATGAGACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACT
TGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAA
GGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACT
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