DN617460

Overview
NameDN617460
Unique NameDN617460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 97/184 (52.72%), Postives = 124/184 (67.39%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET+E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVEY
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY 186          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_LACLM (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 97/184 (52.72%), Postives = 124/184 (67.39%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET+E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVEY
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY 186          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_LACLA (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. lactis GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 97/184 (52.72%), Postives = 124/184 (67.39%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET+E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVEY
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY 186          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_FRASN (S-adenosylmethionine synthetase OS=Frankia sp. (strain EAN1pec) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 99/184 (53.80%), Postives = 117/184 (63.59%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            M T LFTSESV EGHPDK+ DQ+SD++LDA L+ DP+S+VA ET   T  V V GE+TTK  VD   +VR+    IG+ S   G D   C V V+I  QSPDIAQGV      R E          GAGDQG MFG+A DET E MPL   LA +L  RL+ VRK+    +LRPDGKTQVT+EY
Sbjct:    1 MATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTKTYVDIASVVRERILEIGYDSSKKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTEDDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRLSAVRKDGQVGYLRPDGKTQVTIEY 184          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    WLRPD K+QVT  Y
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRY 177          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    WLRPD K+QVT  Y
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRY 177          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45
Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    WLRPD K+QVT  Y
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRY 177          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.311e-45
Identity = 93/180 (51.67%), Postives = 121/180 (67.22%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            +LFTSESV EGHPDK+CDQISD ++DA L QDP+S+VA E    T +V++ GEITTKA+V+Y ++ R     IG+V  + G  AD C VLV +++QS DIAQGV      R        + +GAGDQG MFG+A +ET E MPL   LA ++  +LT VRK     +LRPDGK+QVT+ Y
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTIIDAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGVDKAQETRELLSEEELDAVGAGDQGLMFGFACNETPELMPLPISLAHRVCRQLTAVRKTGQLPYLRPDGKSQVTITY 184          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.311e-45
Identity = 99/182 (54.40%), Postives = 125/182 (68.68%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP++ VA ET   T  V VFGEI+T A VD  ++VR+T   IG+   + G  A+   V  ++ +QSPDIAQGV+      G   + P D IGAGDQG MFG+A DET E MPL   LA +L  +LT++RK+   ++LRPD K+QVTVEY
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY 184          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_STRA3 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype III GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.311e-45
Identity = 99/182 (54.40%), Postives = 125/182 (68.68%), Query Frame = 1
Query:   61 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP++ VA ET   T  V VFGEI+T A VD  ++VR+T   IG+   + G  A+   V  ++ +QSPDIAQGV+      G   + P D IGAGDQG MFG+A DET E MPL   LA +L  +LT++RK+   ++LRPD K+QVTVEY
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY 184          
The following BLAST results are available for this feature:
BLAST of DN617460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACLS4.832e-4552.72S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_LACLM4.832e-4552.72S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_LACLA4.832e-4552.72S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_FRASN4.832e-4553.80S-adenosylmethionine synthetase OS=Frankia sp. (st... [more]
METK_BORPE4.832e-4554.55S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA4.832e-4554.55S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR4.832e-4554.55S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_TRIEI6.311e-4551.67S-adenosylmethionine synthetase OS=Trichodesmium e... [more]
METK_STRA56.311e-4554.40S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA36.311e-4554.40S-adenosylmethionine synthetase OS=Streptococcus a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617460 ID=DN617460; Name=DN617460; organism=Citrus sinensis; type=EST; length=586bp
CTTAAGTCTCGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCT
TGATAAGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTC
ACCCCGACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGC
CTTGAGCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGAC
CAACATGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACT
ATGAGAAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGAT
GATGTGGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCA
ACAAAGCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCC
CTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACT
GATGAGACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACT
TGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAA
GGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACT
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