DN617460

Overview
NameDN617460
Unique NameDN617460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.547e-59
Identity = 115/176 (65.34%), Postives = 136/176 (77.27%), Query Frame = 1
Query:   58 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            + + LF+SE V EGHPDKLCDQ+SDAVLDACL  DP SKVACE+C KT MVMVFGEITTKA +DY+KIVR+T + IGF S D GLD + C VLV IEQQSPDI QG+ G+F    ED+GAGDQG MFGYATDET   MPL++ LA  L  + +E+R++ +  W RPD KTQVTVEY
Sbjct:    3 VHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGL-GNFDS--EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEY 175          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.003e-58
Identity = 110/174 (63.22%), Postives = 135/174 (77.59%), Query Frame = 1
Query:   64 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            +FLFTSESV EGHPDK+ DQ+SDAVLDACL +DP SKVACET TKT M+MVFGEITTKA +DY+KI+R+  + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDET E +PL+ +LA +L A + + R++ +  WLRPD KTQVT+EY
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEY 184          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.234e-58
Identity = 109/174 (62.64%), Postives = 133/174 (76.44%), Query Frame = 1
Query:   64 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            TFLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT M+MVFGEITTKAK+DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  H   R E++GAGDQG MFGYATDET E  PL+ + A KL A ++  R++ +  WLRPD KTQVT+EY
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEY 187          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.109e-57
Identity = 110/183 (60.11%), Postives = 134/183 (73.22%), Query Frame = 1
Query:   37 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A +DY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQY 189          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.109e-57
Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 1
Query:   37 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQY 189          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.109e-57
Identity = 110/173 (63.58%), Postives = 132/173 (76.30%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+CDQISDAVLDA L+QDP +KVACET TKT MVM+ GEIT+KA VDY+ +VR     IGF    +G D   C VLV +EQQSP+IA GV  H  K  ED+GAGDQG MFGYATDET E MPL+ +L+ K+ A L ++R+N T  W+RPD K+QVT+EY
Sbjct:    5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV--HVNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEY 175          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 4.214e-57
Identity = 109/173 (63.01%), Postives = 132/173 (76.30%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA KL AR+ ++R++    WLRPD KTQVTV+Y
Sbjct:   18 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQY 188          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.387e-57
Identity = 109/183 (59.56%), Postives = 135/183 (73.77%), Query Frame = 1
Query:   37 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA +L AR+ E+R++    WL+PD KTQVTV+Y
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQY 189          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.567e-56
Identity = 108/182 (59.34%), Postives = 135/182 (74.18%), Query Frame = 1
Query:   55 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+    +LRPDGK+QVTVEY
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEY 184          
BLAST of DN617460 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.038e-55
Identity = 107/173 (61.85%), Postives = 131/173 (75.72%), Query Frame = 1
Query:   67 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 585
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 176          
The following BLAST results are available for this feature:
BLAST of DN617460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEIIN1.547e-5965.34S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_ASCIM1.003e-5863.22S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK_NEUCR2.234e-5862.64S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK1_RAT1.109e-5760.11S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE1.109e-5760.66S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_CAEEL1.109e-5763.58Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK1_HUMAN4.214e-5763.01S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN9.387e-5759.56S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_BRAHW3.567e-5659.34S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK4_CAEEL1.038e-5561.85Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01D20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617460 ID=DN617460; Name=DN617460; organism=Citrus sinensis; type=EST; length=586bp
CTTAAGTCTCGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCT
TGATAAGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTC
ACCCCGACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGC
CTTGAGCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGAC
CAACATGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACT
ATGAGAAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGAT
GATGTGGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCA
ACAAAGCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCC
CTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACT
GATGAGACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACT
TGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAA
GGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACT
back to top