DN617458

Overview
NameDN617458
Unique NameDN617458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617458_ssr287 microsatellite DN617458_ssr287:287..296. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:491..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 41/88 (46.59%), Postives = 65/88 (73.86%), Query Frame = -3
Query:  397 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 660
            +R  +EII+ IE  A+ +GF     NFK +L+G  + + G L+V  EI+EVAPSL+MV++RK+ G+TLE+HKFYK L + L++++W++
Sbjct:  344 RREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWRA 431          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 37/87 (42.53%), Postives = 59/87 (67.82%), Query Frame = -3
Query:  400 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK 660
            ++P   I++ IE  A  +G  V   N+KL+L+G  + R    +V  ++FEVAPSL+MV++RK  GDTLE+H+FYKNL   ++ ++W+
Sbjct:  351 RKPAKTIVATIEVVAETMGLKVHSQNYKLRLEGVSSNRMSPFAVVLQVFEVAPSLFMVDVRKVAGDTLEYHRFYKNLCNKMESIIWR 437          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = -3
Query:  388 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKSGDE 660
            ++P + I+SK+E+ A    F VKK +  +KLQG K GRKG L++  EIFEV PS ++VE++KS GDTLE+ KF  K L   L+D+ W    E
Sbjct:  348 QKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSE 439          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.016e-15
Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = -3
Query:  400 KRPVNEIISKIEE-AASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVWK 660
            K+   EI+SK EE A S   F++ K++  +K++ ++ GRKGHL++  EIFEV  S +MVE +KSGGDT+E+ +F  + L   LKD+VWK
Sbjct:  334 KKDAKEIVSKFEEIATSSERFNLTKSDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWK 422          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.123e-14
Identity = 32/86 (37.21%), Postives = 57/86 (66.28%), Query Frame = -3
Query:  403 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVW 660
            ++P   I+S +E  A  +G+     N+K++++G    +  HL+V  EIFEVAPS++M+EL+++ GDT +++KF  N  + L D++W
Sbjct:  344 RKPAKVIMSSMEVVAQSMGYKTHIRNYKMRVEGLNANKTSHLAVMLEIFEVAPSIFMIELQRAAGDTSDYNKFINNYCSKLDDIIW 429          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.123e-14
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -3
Query:  397 RPVNEIISKIEEAASPLG-FDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN-LSTGLKDVVWKS 657
            RP + +IS +EEAA     FDV+K+  +++++G++ GRKG L+V  EIF VAPS  +VE++K  GDTLE++ F    L   LKD+ W S
Sbjct:  350 RPASSVISSLEEAARVGNKFDVRKSESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWTS 438          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.915e-14
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = -3
Query:  397 RPVNEIISKIEEAASPLGFDVKKNNFK--------LKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKS 657
            +P   I+S++EE A    F VKK   K        +KLQG K GRKG L++  EIFEV+PS Y+VE++K+ GDTLE+  F  ++L   L D+ W S
Sbjct:  346 KPATAIVSRLEEIAETEHFTVKKKQKKRQEEDGMAVKLQGWKEGRKGQLAIDAEIFEVSPSCYVVEVKKTAGDTLEYQAFCNRDLRPSLNDICWTS 441          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.915e-14
Identity = 32/92 (34.78%), Postives = 57/92 (61.96%), Query Frame = -3
Query:  382 RPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDETI 657
            +P N ++S +E  +  +GF     N+K++++G    +  H SV  E+F+VAPS+ MV+++ + GD  E+ KFYK   + L D++WK  D ++
Sbjct:  342 KPANVVLSSMEVVSQSMGFKTHIRNYKMRVEGLSANKTSHFSVILEVFKVAPSILMVDIQNAAGDAEEYLKFYKTFCSKLDDIIWKPPDASM 433          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = -3
Query:  388 KRPVNEIISKIEEAASPLGFDVKK-NNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVWK-SGDE 660
            ++PV  ++ K++E A  L   VKK +N  L+L   K G+KG L +  EIFEV PS  +VEL+K+ GDT+E+ K  K ++   LKD+VW   GDE
Sbjct:  346 RQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDE 439          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = -3
Query:  376 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKSGDETIVE 654
            PV++IISK+EE A  + F V+K  + L+L+G + G KG L++A EIFE+ PSL +VE++K GGD  E+ +F  K L   L+ ++    +E +VE
Sbjct:  420 PVSKIISKLEEIAKIVSFTVRKKEWSLRLEGCREGAKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYEEFCNKELRPELEKLI---HEEVVVE 510          
The following BLAST results are available for this feature:
BLAST of DN617458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CIPKO_ARATH1.674e-1846.59CBL-interacting serine/threonine-protein kinase 24... [more]
CIPKO_ORYSJ1.085e-1742.53CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
CIPK5_ORYSJ1.085e-1747.83CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPKK_ARATH1.016e-1547.19CBL-interacting serine/threonine-protein kinase 20... [more]
CIPK8_ORYSJ1.123e-1437.21CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
CIPK6_ARATH1.123e-1446.07CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKK_ORYSJ1.915e-1444.79CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPK8_ARATH1.915e-1434.78CBL-interacting serine/threonine-protein kinase 8 ... [more]
CIPKB_ORYSJ9.505e-1444.68CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKI_ARATH2.118e-1343.62CBL-interacting serine/threonine-protein kinase 18... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617458 ID=DN617458; Name=DN617458; organism=Citrus sinensis; type=EST; length=662bp
CCCTTTTTTTTTTTTACAATATATTTATTCTTTATTTGAATTTTCGTGGT
CCATAGACAAGTCACTAAAAACAAACAAAATGAAAATGACAGTGGACTGA
GAGTCTTTTTGATTATTTGCAGGTAATTGACTACGTTCAATATCCGTTGA
GATGATACAACTGGAAGTCTGAAACCACACAAAAGCCAAACCAAGGTACA
CGAGAAGTGAGTTCTGAATCACAAATGAAGGAAACACATGGCCTAGAGGA
TAAAATACAAAGCTGAGATACAATGGTGCAAAAGCAATATATATATTTGC
TGGAGATATTCAGCAGTGCAAGTCATGAAAGGAAATCCGCTATTGAGACC
CTGCGCCACCAGCGACTGCAGATCCTTCAACAATTGTTTCATCTCCTGAT
TTCCAAACAACATCTTTCAGCCCAGTCGAAAGGTTTTTGTAAAACTTGTG
AAATTCTAAGGTATCTCCTCCAGATTTTCGAAGCTCAACCATGTAAAGTG
AAGGGGCCACCTCAAAAATCTCTGTTGCAACAGATAAATGACCCTTGCGT
CCAGTTTTTTCCCCTTGAAGCTTCAACTTGAAATTATTTTTCTTCACATC
AAAACCCAAAGGCGATGCAGCTTCCTCAATTTTCGATATAATTTCGTTAA
CAGGACGTTTGG
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