DN617458

Overview
NameDN617458
Unique NameDN617458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617458_ssr287 microsatellite DN617458_ssr287:287..296. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:491..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13
Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = -3
Query:  433 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN 654
            PV++IISK+EE A  + F V+K + ++ L+G + G KG L++A EIFE+ PSL +VE++K GGD  E+  F  N
Sbjct:  373 PVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKTEYEDFCNN 446          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = -3
Query:  403 KRPVNEIISKIEEAASPLGFDVKKNNFKL-KLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 660
            ++P + IISK+EE A  L   ++K    L KL+  K GRKG LS+  EIF+V P+ ++VE++KS GDTLE+ K   ++L   L D+VW
Sbjct:  358 QKPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEVKKSNGDTLEYQKLVAEDLRPALSDIVW 445          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = -3
Query:  403 EIISKIEEAASPLGFDVKKN-NFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 645
            E++ KIE     +   VK+  +FK+K++G+  GRKG LS+  E+FEVAP + +VE  KS GDTLE+ + Y + +   L D+VW
Sbjct:  349 EVMEKIETVTKEMNMKVKRTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVW 431          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = -3
Query:  403 IISKIEEAASPLGFDVKKNNFK-LKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEF-HKFYKNLSTGLKDVVW 642
            IISK+E+ AS     VKK     LK++G   GRKG L++  EIFEV PS ++VE++K+ GDTLE+ H + +++   LKD+VW
Sbjct:  359 IISKLEDVASCSKLTVKKKEGGVLKMEGASEGRKGVLAIDAEIFEVTPSFHLVEIKKNNGDTLEYQHLWKEDMKPALKDIVW 440          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = -3
Query:  403 IISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHK-FYKNLSTGLKDVVW 642
            IISKIE+ A  L   + KK+   LK++G K GRKG + +  EIFEV P+ ++VEL+K+ GDTLE+ K   + +   LKD+VW
Sbjct:  347 IISKIEDIAKGLRLKLTKKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVW 428          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = -3
Query:  403 IISKIEEAASPLGFDVK-KNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVW 642
            I+SK+EE A    F  K K   +++L+G + GRKG L++  EIF+VAP +++VE+RK+GGD+ +F  FYK  L   L D+VW
Sbjct:  372 IVSKLEEIAEAGRFSFKLKEKGRVELEGSQDGRKGALAIEAEIFKVAPEVHVVEVRKTGGDSPDFRDFYKQELKPSLGDMVW 453          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12
Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = -3
Query:  403 NEIISKIEEAASPLGFDVKKN-NFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 648
            +EI+ K+E     +   VK+  +FK+KL G+  GRKG ++V  E+FEVAP + +VEL KS GDTLE+++ Y +++   L+++VW
Sbjct:  377 SEIMGKLEGIGKEMNMKVKRTKDFKVKLFGKTEGRKGQIAVTAEVFEVAPEVAVVELCKSAGDTLEYNRLYEEHVRPALEEIVW 460          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12
Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = -3
Query:  394 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGR-KGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKSG 654
            PV +IISK+EE A  + F V+K + K+ L+G + G  KG LS+A EIFE+ P+L +VE++K GGD +E+ +F  K L   L+++  ++G
Sbjct:  377 PVGQIISKLEEIARIVSFTVRKKDCKVSLEGSREGSMKGPLSIAAEIFELTPALVVVEVKKKGGDKMEYDEFCNKELKPKLQNLSSENG 465          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  403 IISKIEEAASPLGFD-VKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVW 642
            I  K+E+ A  L    +KKN   LK++G K GRKG +S+  EIF++ P  ++VE  K  GDTLE+ K  + +   LKD+VW
Sbjct:  355 ITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEYQKVKQEMRPALKDIVW 435          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = -3
Query:  388 KRPVNEIISKIEEAASPLGFDVKK-NNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVWK-SGDE 660
            K P   +  ++E AA  +   VK   + K+KLQ    GRKG LSV  E+FEVAP + +VE  K+ GDTLE++ F + ++   LKD+VW   GD+
Sbjct:  354 KFPAKSVKERLETAAREMDMRVKHVKDCKMKLQRRTEGRKGRLSVTAEVFEVAPEVSVVEFCKTSGDTLEYYLFCEDDVRPALKDIVWSWQGDD 447          
The following BLAST results are available for this feature:
BLAST of DN617458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CIPKC_ARATH2.118e-1347.30CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKA_ARATH3.612e-1345.45CBL-interacting serine/threonine-protein kinase 10... [more]
CIPK5_ARATH4.717e-1343.37CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKI_ORYSJ6.161e-1347.56CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPK2_ORYSJ6.161e-1347.56CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKU_ORYSJ1.051e-1246.34CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKP_ARATH1.373e-1242.86CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKJ_ARATH1.373e-1243.82CBL-interacting serine/threonine-protein kinase 19... [more]
CIPKA_ORYSJ2.341e-1243.21CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPKG_ARATH8.897e-1242.55CBL-interacting serine/threonine-protein kinase 16... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617458 ID=DN617458; Name=DN617458; organism=Citrus sinensis; type=EST; length=662bp
CCCTTTTTTTTTTTTACAATATATTTATTCTTTATTTGAATTTTCGTGGT
CCATAGACAAGTCACTAAAAACAAACAAAATGAAAATGACAGTGGACTGA
GAGTCTTTTTGATTATTTGCAGGTAATTGACTACGTTCAATATCCGTTGA
GATGATACAACTGGAAGTCTGAAACCACACAAAAGCCAAACCAAGGTACA
CGAGAAGTGAGTTCTGAATCACAAATGAAGGAAACACATGGCCTAGAGGA
TAAAATACAAAGCTGAGATACAATGGTGCAAAAGCAATATATATATTTGC
TGGAGATATTCAGCAGTGCAAGTCATGAAAGGAAATCCGCTATTGAGACC
CTGCGCCACCAGCGACTGCAGATCCTTCAACAATTGTTTCATCTCCTGAT
TTCCAAACAACATCTTTCAGCCCAGTCGAAAGGTTTTTGTAAAACTTGTG
AAATTCTAAGGTATCTCCTCCAGATTTTCGAAGCTCAACCATGTAAAGTG
AAGGGGCCACCTCAAAAATCTCTGTTGCAACAGATAAATGACCCTTGCGT
CCAGTTTTTTCCCCTTGAAGCTTCAACTTGAAATTATTTTTCTTCACATC
AAAACCCAAAGGCGATGCAGCTTCCTCAATTTTCGATATAATTTCGTTAA
CAGGACGTTTGG
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