DN617456

Overview
NameDN617456
Unique NameDN617456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:866..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.474e-41
Identity = 81/133 (60.90%), Postives = 93/133 (69.92%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQ TG  IQ   I A+SDL+PV   FPTYLGRPWK+YSRTV+M+S +  +I+PAGW EWDG+FAL TL+YGE  N G GAGTS RVKW G+  IT   EA  FT    I G SWL STG  +  GL
Sbjct:  416 AQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 7.158e-40
Identity = 80/129 (62.02%), Postives = 91/129 (70.54%), Query Frame = -3
Query:  171 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 557
            AQGR D NQNT I IQK +I A+SDL PV+GS  T+LGRPWK YSRTVIMQS I + I PAGW  WDG FAL+TL+YGE+ N G GA TS RV WKGF+VI  + EA+ FT    I G  WL  TG  F
Sbjct:  425 AQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.595e-39
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R DPNQNTGI I   ++ AT DL+  +GS+PTYLGRPWK YSR V M S + D I P GW EW+G FAL++L+YGE+ N G G+G   RVKW G+ VITS  EA  FT   FI+GSSWL STG  F  GL
Sbjct:  453 AQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 80/135 (59.26%), Postives = 92/135 (68.15%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW--DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DP QNTGI I  SRI A SDLKPV  ++ TYLGRPW+ YSR  IM++ I + I P GW  W    NFALNT+FYGE++N G G+ T  RV+WKGF  ITS   A  FT GS IAG SWL +TG PF  GL
Sbjct:  460 AQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 79/133 (59.40%), Postives = 91/133 (68.42%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQ TG  IQ   I A+ DLKPV   FPTYLGRPWK+YSRTV+M+S +  +I P+GW EW G+FAL TL+YGE  N G GAGTS RVKW G+ VIT   EA +FT    I G SWL ST   +  GL
Sbjct:  416 AQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.914e-39
Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DP+ N+GI IQ SRI A  + + V+G F +YLGRPWK+YSRTV +++ I ++I P GW EW G++AL+TL+YGE  N GAGAGT  RV W GF V+    EA  FT   FI G SW+  TG PFS G+
Sbjct:  387 AQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.007e-38
Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQNTGI I   ++ A +DL PV  SF TYLGRPWKEYSRTV + S +  +I PAGW EW G+FAL TL+Y E++N G G+ T+ RV W G+ V T+ TE   FT G+FI GS WL S   P  L L
Sbjct:  188 AQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNL 320          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.492e-37
Identity = 76/133 (57.14%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQ TG  IQ   I A+ DL+PV   + TYLGRPWK++SRTV+MQS +   I P+GW EW G+FAL TL+YGE  N G GAGTS RVKW G+ VIT   EA  FT    I G SWL ST   +  GL
Sbjct:  410 AQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.492e-37
Identity = 77/133 (57.89%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R DPNQNTGI I  SR+ A SDL+   GS  TYLGRPWK +SRTV M S I   +H  GW EW+  FAL+TL+YGE+ N+G G+G   RV W G+RVI S  EA  FT   FI GSSWL STG  F  GL
Sbjct:  464 AQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.546e-37
Identity = 75/131 (57.25%), Postives = 93/131 (70.99%), Query Frame = -3
Query:  168 AQGRADPNQNTGIVIQKSRIGATSDLKPVQ-GSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 557
            AQGR DPN+ TGI IQ   I A SDL+     S PTYLGRPWK YSRTVIMQS +++VI P GW EW+G+FALN+LFYGE+ N G GAG   RVKW G++V   +T+A+ +T   FI G+ WL STG  ++
Sbjct:  387 AQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
The following BLAST results are available for this feature:
BLAST of DN617456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME22_SOLLC6.474e-4160.90Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME18_ARATH7.158e-4062.02Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME61_ARATH1.595e-3958.65Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME33_ARATH3.552e-3959.26Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME21_SOLLC3.552e-3959.40Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME36_ARATH7.914e-3954.89Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_ACTDE3.007e-3856.39Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME3_SOLLC1.492e-3757.14Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME34_ARATH1.492e-3757.89Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_PRUPE2.546e-3757.25Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617456 ID=DN617456; Name=DN617456; organism=Citrus sinensis; type=EST; length=559bp
TCCCATGCTATTTTATTTCTCTGTTAATCACACAATAGTATTTGTGAAAT
CGAAGCCACGAATAAGACACGCTCAATCAAATATTACAAATTGAAAGACC
AGAGACCTATGGATCCACTAATACAAAACATATTAATTAAAACTCCTAGT
GAATATTACAAACCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCT
ACTACCAGCAATGAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCAC
TTGTAATAACCCTAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCA
CCGGCTCCGGCGTTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAA
GTTACCATCCCACTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCG
ATGACTGCATGATCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGG
TACGTCGGGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAAT
CCTAGATTTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGC
CTTGGGCTG
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