DN617456

Overview
NameDN617456
Unique NameDN617456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:866..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.325e-37
Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGN-FALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGRADP QNTGI I  SRI    DLKPV G+  TY+GRPW ++SRTV++Q+ + +V+ P GW  W +G+ F L+TLFY E++N G  + T  RV WKGF V+  A++A AFT G FIAG++WL  TG PF+ GL
Sbjct:  402 AQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37
Identity = 76/133 (57.14%), Postives = 86/133 (64.66%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR+DPNQNTGI I   RI          GS  TYLGRPWK+YSRTV+MQS I   IHP+GW  W  NFAL TL+YGE  N+G G+  SGRV W G+    + TEAQ FT   FI G+SWL STG  F  GL
Sbjct:  405 AQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.674e-37
Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = -3
Query:  162 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 557
            AQ R   +Q TGI I   RI A  DL PV+ +F  YLGRPW++YSRTVI++S I D+IHPAGW E   +FAL TL+YGE+ N G GA  + RV W GFR I + TEA  FT G FI GS+WL STG PFSLG
Sbjct:  400 AQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.676e-36
Identity = 72/133 (54.14%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPN+ TG  IQ S I A +DL     +  TYLGRPWK YSRTV MQ+ ++D I+P GW EW+GNFAL+TL+YGE+ N+G GA    RVKW G+ V+ ++ EA  FT    I G+ WL STG  F  GL
Sbjct:  393 AQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.824e-35
Identity = 75/133 (56.39%), Postives = 86/133 (64.66%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR++P QNTGI IQ  RI A S          TYLGRPWKEYSRTV+MQS I   IHP+GW  W G F L +LFYGE+ N+G G+  SGRVKW G     + TEA+ FT  SFI G+ WL STG  F  GL
Sbjct:  393 AQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35
Identity = 70/133 (52.63%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQNTGI I    I    DL     +  TYLGRPWKEYSRTV MQS I +V+ P GW EW+G+FAL+TL+Y E+ N G+G+ T+ RV W G+ VI S T+A  FT  +F+ G  W+  +G P+  GL
Sbjct:  440 AQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35
Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR D NQ +G  IQ S I A +DL P   +  TYLGRPWK YSRTV ++++++DV+ P GW EW+ +FAL+TLFYGE  N G G+G S RVKW G+ V  ++ +A  FT   FI G+ WL STG  FS GL
Sbjct:  391 AQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35
Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR +  + TGI I  SRI A  DL PVQ +F  YLGRPW+ YSRTVIM+S I D++ PAGW +W  +FAL TL+YGE+ N G G+  + RV+W GF+ I +  EA  F+ G FI G+ WL ST  PF+L L
Sbjct:  386 AQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPNQNTG  I    I    DL     +  TYLGRPWKEYSRTV+MQ+ I   + P+GW+ W G+FAL+TL+Y E+ N G G+ T+ RV W G+ VI +AT+A  FT  +F+ G  W+G TG PF  GL
Sbjct:  427 AQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.307e-33
Identity = 72/133 (54.14%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR  PNQNTG VIQ S + AT          PTYLGRPWK YSRTV M + ++ ++ P GW EW GNFAL+TL+YGE+ N G G  +SGRVKW G+ ++   T A +FT GSFI G  WL +TG  F+ GL
Sbjct:  419 AQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
The following BLAST results are available for this feature:
BLAST of DN617456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME59_ARATH3.325e-3754.81Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME35_ARATH7.407e-3757.14Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH9.674e-3758.33Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME32_ARATH3.676e-3654.14Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME16_ARATH1.824e-3556.39Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME41_ARATH2.383e-3552.63Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME44_ARATH3.112e-3553.38Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME40_ARATH5.308e-3553.38Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME20_ARATH5.308e-3551.88Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH1.307e-3354.14Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617456 ID=DN617456; Name=DN617456; organism=Citrus sinensis; type=EST; length=559bp
TCCCATGCTATTTTATTTCTCTGTTAATCACACAATAGTATTTGTGAAAT
CGAAGCCACGAATAAGACACGCTCAATCAAATATTACAAATTGAAAGACC
AGAGACCTATGGATCCACTAATACAAAACATATTAATTAAAACTCCTAGT
GAATATTACAAACCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCT
ACTACCAGCAATGAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCAC
TTGTAATAACCCTAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCA
CCGGCTCCGGCGTTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAA
GTTACCATCCCACTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCG
ATGACTGCATGATCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGG
TACGTCGGGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAAT
CCTAGATTTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGC
CTTGGGCTG
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