DN617456

Overview
NameDN617456
Unique NameDN617456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:866..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR+DPNQNTG  IQ   I    DL     +  TYLGRPWKEYSRTV MQS I   + P GW EW+G+FAL+TL+Y E+ N G G+ T+ RV W G+ VI S T+A  FT       + W+  TG P++ GL
Sbjct:  446 AQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32
Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R +P++ TG VIQ S +   S+         TYLGRPW+ +SRTV M+ ++  ++ PAGW  W G+FAL+TL+YGE+ N GAGA  SGRVKW G+ VI + TEA+ FT  +F+ G+ W+ +TG P + GL
Sbjct:  431 AQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32
Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  168 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW--DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 557
            AQGR D  QNTGI I  S I    DLKPV  S  TY+GRPW  YSRTV++++ I  V+ P GW  W     + L+TLFY E++N G  + T  RV+WKGF V++ A++A AF+ G FIAG++WL  +G PF+
Sbjct:  406 AQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFT 537          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32
Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            A GR DPNQNTGI I    I A  DL     S  T+LGRPWK YSRTV MQS I+D++ P GW EW+G   L+T++YGE+ N G GA T+ RV+W G+ ++  A EA  FT  +F  G +WL  T  PF  GL
Sbjct:  484 AHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.174e-32
Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR D  Q TG V+   +I A  DLKPV+  + +YLGRPWK YSRT+IM+S I +VI P GW  W + +FA++TL+Y E+ N G+   T+ RVKW GF+VI +  EA  +T G F+ G  W+ ++G P  LGL
Sbjct:  480 AQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQG-DWISASGSPVKLGL 611          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = -3
Query:  168 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 557
            AQGR D  + TGIVI  SRI   +   PV+     +LGRPWKE+SRT+IM + I DVI P GW +W+  FALNTLFY E++N G G+G   RV+W+G + I S   A+ F PG+F+ G++W+  T  P++
Sbjct:  571 AQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPYN 699          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 67/134 (50.00%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR D  Q TG VI    +    DLKPV+  F +YLGRPWK +SRTV+M+S+I DVI P GW  W + +FA++TL Y E++N G    T+ RVKW GFRV+ +  EA  FT G F+ G  W+ + G P  LGL
Sbjct:  475 AQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQG-EWIQAIGSPVKLGL 606          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.932e-31
Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            A GR DPNQ TGI I    IGA  DL     S  T+LGRPWK YSRTV +QS I+DV+ P GW EW+G   L+T+ YGE+ N G GA TS RV+W G+ ++ +  +A  FT  +F  G +WL  T  PF  GL
Sbjct:  489 AHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30
Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R +PNQ TGIVI  S +     ++   G   TYLGRPW+ Y+RTV++ + +  +I P GW +WD   AL+TL+YGE+QN+G G+GT  RV W GF VI+   EA+ FT   FI  +SWL  T  PF++ L
Sbjct:  344 AQSRFNPNQTTGIVIHNSVVKGAPGVQ--LGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30
Identity = 64/133 (48.12%), Postives = 78/133 (58.65%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            A GR DP ++TG V+Q   I    D   V+    TYLGRPWKEYSRT+IM + I D + P GW  W G F LNTLFY E QN G GA  + RV W G + + S  E   FTP  +I G +W+   G P+ LGL
Sbjct:  431 AHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKL-SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
The following BLAST results are available for this feature:
BLAST of DN617456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME7_ARATH2.230e-3351.13Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME6_ARATH1.888e-3248.12Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME60_ARATH1.888e-3250.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME25_ARATH4.206e-3251.13Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME13_ARATH7.174e-3249.25Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME43_ARATH2.087e-3148.46Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME45_ARATH3.561e-3150.00Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME47_ARATH7.932e-3150.38Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME38_ARATH3.937e-3047.37Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME28_ARATH3.937e-3048.12Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617456 ID=DN617456; Name=DN617456; organism=Citrus sinensis; type=EST; length=559bp
TCCCATGCTATTTTATTTCTCTGTTAATCACACAATAGTATTTGTGAAAT
CGAAGCCACGAATAAGACACGCTCAATCAAATATTACAAATTGAAAGACC
AGAGACCTATGGATCCACTAATACAAAACATATTAATTAAAACTCCTAGT
GAATATTACAAACCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCT
ACTACCAGCAATGAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCAC
TTGTAATAACCCTAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCA
CCGGCTCCGGCGTTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAA
GTTACCATCCCACTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCG
ATGACTGCATGATCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGG
TACGTCGGGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAAT
CCTAGATTTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGC
CTTGGGCTG
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