DN617456

Overview
NameDN617456
Unique NameDN617456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:866..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.496e-29
Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = -3
Query:  171 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 557
            AQGR+D  ++TG+V+Q   I       PV+     YLGRPWKE+SRT+IM ++I DVI PAGW  W+G+FALNTL+Y E++N G G+  + RVKW G + + S  +A  FTP  F+ G+ W+     P+
Sbjct:  439 AQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.685e-29
Identity = 67/133 (50.38%), Postives = 78/133 (58.65%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQGR DPN NTGI I +  I    DL  V     T+LGRPWK +S TVIM S +   I   GW  W G+ A +T+FYGE++N G GA T  RVKWKG R + S  EA  FT   FI G  WL +T  PF  GL
Sbjct:  434 AQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.685e-29
Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            A GR DP ++TG V Q   I    D   V+ +   YLGRPWKEYSRT+IM + I D + P GW  W G+F L TLFY E QN G G+  + RV W G + + S  +   FTP  +I G  W+   G P++ GL
Sbjct:  434 AHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.696e-29
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -3
Query:  168 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 557
            AQGR DPNQNTGI I    I    +L  +Q    T+LGRPWK++S TVIM+S +   I+P GW  W G+ A +T+FY E+ N+G GA T  RVKW+G +   +  EA  FT   FI G++WL +T  PF+
Sbjct:  436 AQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.208e-28
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R   +++TGI +Q   I A+ DL        +YLGRPW+E+SRTV+M+S I + I  +GW +W+G  AL+TL+YGE+ N G G+ T  RV W GF ++    +A  FT   FI G  WLGST FP+  G+
Sbjct:  416 AQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.400e-27
Identity = 63/130 (48.46%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  171 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFAL-NTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 557
            AQG+ DPNQNTGI+IQKS I    +      + PTYLGRPWK++S TVIMQS I  +++P GW  W  N     T+FY E+QN+G GA  S RVKW G++   +   A+ FT  SFI G  WL +    F
Sbjct:  452 AQGKKDPNQNTGIIIQKSTITPFGN----NLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 1.400e-27
Identity = 56/130 (43.08%), Postives = 82/130 (63.08%), Query Frame = -3
Query:  168 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 557
            AQGR++  ++TG+V+    I       P++     YLGRPWKE+SRT+IM+++I DVI PAGW  W G+FAL TL+Y EH N G G+  + RVKW G + +T   +A  +T   F+ G +W+  T  P++
Sbjct:  437 AQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.074e-27
Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ RA  +  +G  IQK  I A+SDL     +  TYLGRPW+ +S   +MQS I D++ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  T  P+  GL
Sbjct:  394 AQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.003e-25
Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ R   +  +G  IQ   I A+SDL     +  TYLGRPW+ +S   ++QS I D++ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  394 AQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.712e-25
Identity = 57/133 (42.86%), Postives = 76/133 (57.14%), Query Frame = -3
Query:  159 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 557
            AQ RA  +  +G  IQ   I  +SDL     +  TYLGRPW+ +S   ++QS I D++ PAGW  W G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  367 AQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
The following BLAST results are available for this feature:
BLAST of DN617456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME58_ARATH1.496e-2946.51Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME24_ARATH5.685e-2950.38Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME21_ARATH5.685e-2944.36Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME46_ARATH9.696e-2947.69Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME12_ARATH8.208e-2845.11Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME3_PHAVU1.400e-2748.46Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME23_ARATH1.400e-2743.08Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME19_ARATH4.074e-2745.86Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME42_ARATH1.003e-2542.86Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH1.712e-2542.86Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617456 ID=DN617456; Name=DN617456; organism=Citrus sinensis; type=EST; length=559bp
TCCCATGCTATTTTATTTCTCTGTTAATCACACAATAGTATTTGTGAAAT
CGAAGCCACGAATAAGACACGCTCAATCAAATATTACAAATTGAAAGACC
AGAGACCTATGGATCCACTAATACAAAACATATTAATTAAAACTCCTAGT
GAATATTACAAACCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCT
ACTACCAGCAATGAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCAC
TTGTAATAACCCTAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCA
CCGGCTCCGGCGTTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAA
GTTACCATCCCACTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCG
ATGACTGCATGATCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGG
TACGTCGGGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAAT
CCTAGATTTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGC
CTTGGGCTG
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